Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_006641.1 Length=15959 Score E Sequences producing significant alignments: (Bits) Value seq369 84.2 2e-12 >seq369 Length=79321 Score = 84.2 bits (92), Expect = 2e-12 Identities = 101/137 (74%), Gaps = 3/137 (2%) Strand=Plus/Minus Query 712 TCATTGACTCCTGGGCAGGATGGGCACTCTGGGGAATTATCATGCTTGGAGCGGTGGAGA 771 || ||||||||| |||| | |||| |||||||||| |||| |||| | |||| | Sbjct 27627 TCTTTGACTCCTTTGCAGATTAGGCAGTCTGGGGAATCTTCATACTTGTATTTGTGGGGG 27568 Query 772 TACGCCCGGAAACAGCCGTGTCCTGATAACATCTGTGTAAGATAATAGTTGACCTCACCG 831 || |||||||| | ||||||||||| | |||||| || || || || || || || || Sbjct 27567 TATGCCCGGAAGCTCCCGTGTCCTGAAAGCATCTGCGTCAGGTAGTAATTAACGTCTTCG 27508 Query 832 TGACTCCGGTTTAGCCA 848 | | ||||||| ||| Sbjct 27507 T---TGCGGTTTATCCA 27494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50949235910736