Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_006657.1 Length=19820 Score E Sequences producing significant alignments: (Bits) Value seq322 86.0 8e-13 >seq322 Length=98727 Score = 86.0 bits (94), Expect = 8e-13 Identities = 148/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 12200 ACCATCTGGTTCTTGATGTTTGATGATATTCTTTCATCAAAGAATGCCATAGCTACAGTT 12259 ||||||| | ||||| | |||| | |||||||||| ||||||| || || ||| Sbjct 14068 ACCATCTTGCGCTTGACATCAAATGACACATTTTCATCAAAAAATGCCAGGGCAACGGTT 14009 Query 12260 TCTGGGTTTAAATACCACAAATGCATGCTAAATTTTTTCAA--TGCCACTTCAGATATTT 12317 || | || | |||| | || || | || |||||||| | || || | | | | | Sbjct 14008 TCAGCATTCAGATACTATAAGTGTTTCCTGAATTTTTTGAGAGTGGCATTCGATACACCT 13949 Query 12318 TAGCATCTGTCGATTGATAATCAATAAGTTCCTTTAAAAATGATAAATCATTATTTGGAG 12377 | | || |||||| ||||| | || | ||| |||||| ||||||||||| ||| | Sbjct 13948 TCG--TCAATCGATTTATAATTATAGAGGTTCTTCAAAAATTGTAAATCATTATCTGGCG 13891 Query 12378 CTTCAGATGCGAGAGGACAAGTGAACCATGCTT 12410 || |||| || || || |||||||||||||| Sbjct 13890 CTACAGACGCAAGTGGGACAGTGAACCATGCTT 13858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 63304153625304