Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_006660.1 Length=20197 Score E Sequences producing significant alignments: (Bits) Value seq377 91.5 2e-14 >seq377 Length=50575 Score = 91.5 bits (100), Expect = 2e-14 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 16830 TAAACTTTCAGCCAAATCAAAAGGGGTCAGGGTCAAAAGTGGTCGATTTGGCGTGGAATG 16889 |||| |||||||| ||||||||| ||||||| ||||||| ||||||||||||||||||| Sbjct 31211 TAAAATTTCAGCCCAATCAAAAGAGGTCAGGTTCAAAAGCGGTCGATTTGGCGTGGAATA 31152 Query 16890 CCCCCTAT 16897 |||| ||| Sbjct 31151 CCCCGTAT 31144 Score = 86.0 bits (94), Expect = 8e-13 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 15296 TATGGGGCATTCCACGCCAAATCAACCACTTTTGACCCTGACCCCTTTTGATTTGGCTGA 15355 || |||| ||||||||||||||| ||| ||||||| ||||||| ||||||||| |||||| Sbjct 31145 TACGGGGTATTCCACGCCAAATCGACCGCTTTTGAACCTGACCTCTTTTGATTGGGCTGA 31204 Query 15356 AAGTTTA 15362 || |||| Sbjct 31205 AATTTTA 31211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 64510526062080