Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_009816.1 Length=70579 Score E Sequences producing significant alignments: (Bits) Value seq1322 89.7 2e-13 >seq1322 Length=110664 Score = 89.7 bits (98), Expect = 2e-13 Identities = 163/239 (68%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 60129 AACGTGACATCAGGAACGATAACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTCG 60188 || || | |||||||| | ||||||| || | | |||||||| || || || || Sbjct 81163 AAAGTAATATCAGGAATAACTACTCCTAAAGACATTGATTTAATACGAATTTTTTCATCT 81222 Query 60189 GCGTTTTCACGCTTGGTATCCAGGAACGCAAGGATGTCGGGGTGGTGTGCGTTCAAATAT 60248 || ||||||||||| | ||| | || | || || || || || | || ||||| Sbjct 81223 GCATTTTCACGCTTTGAATCTAAAAATAACATAATATCTGGATGATGAACATTTAAATAA 81282 Query 60249 ACCGCCCCTGCGCCCTGCCTTGCACCCAGTTGGTTAGAGTAGGAGAAGCTATCTTCTAGA 60308 || ||||| || || || ||| ||| ||||| |||| || || || |||||| ||| Sbjct 81283 ACTGCCCCAGCACCTTGTCTTTGACCTAGTTGATTAGCATATGAAAATGAATCTTCAAGA 81342 Query 60309 ATCTTCATCACAGGGATGACTCCAGAGGCCTGACCTTCTCGACCCTTAATCGGAGCTCC 60367 || ||||| || ||||| || || | || ||| || | ||||| |||||||| Sbjct 81343 ATTTTCATAACTGGGATAACGCCTGTTGCTTGATTTTTAATATTTTTAATTGGAGCTCC 81401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 225722563905440