Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_009904.1 Length=142072 Score E Sequences producing significant alignments: (Bits) Value seq1322 113 4e-20 >seq1322 Length=110664 Score = 113 bits (124), Expect = 4e-20 Identities = 283/425 (67%), Gaps = 10/425 (2%) Strand=Plus/Plus Query 133033 TATCGGGAACAACTACTCCCAAAGAAAGTGTTTTGATTTGCTTTGCGGATTCTGCATTTT 133092 |||| |||| ||||||||| ||||| | || ||| || | || |||||||||| Sbjct 81170 TATCAGGAATAACTACTCCTAAAGACATTGATTTAATACGAATTTTTTCATCTGCATTTT 81229 Query 133093 CTTTTCTAGTTGA---TAAAAAGTCCATAATATCCGCATGGAAAACATTTAGATAGACTG 133149 | || |||| |||||| ||||||||| | ||| |||||||| ||| |||| Sbjct 81230 CACG-CT--TTGAATCTAAAAATAACATAATATCTGGATGATGAACATTTAAATAAACTG 81286 Query 133150 CGCCTGCACCTTGTCTTTGCCCTAATTGATTTGCGTACCGGAAACCATCTTCTAGCATTT 133209 | || |||||||||||||| |||| |||||| || || || |||||| || |||| Sbjct 81287 CCCCAGCACCTTGTCTTTGACCTAGTTGATTAGCATATGAAAATGAATCTTCAAGAATTT 81346 Query 133210 TCATAACAGGGACGACACCACTACCTGCCCCCTCAATTCCCTTAATAGGGTCACCAAGAG 133269 ||||||| |||| || || | || | ||| ||||| || | |||| Sbjct 81347 TCATAACTGGGATAACGCCTGTTGCTTGATTTTTAATATTTTTAATTGGAGCTCCAAATT 81406 Query 133270 CTCTTAAGTTTGAAAGATTTATGCCGACTCCTCCGCCAAGTTTAGATAGTTGAAGTGCAC 133329 ||||||| |||| | | | | ||||| || ||| |||| |||| || | || | Sbjct 81407 CTCTTAAATTTGTTAAACACAAAGCAACTCCACCACCACGTTTTGATAACTGTAATGAAG 81466 Query 133330 TGTTCAACGTTCTACCAATTGAAGACATTGAATCTTCTACTTGAATTAGAAAACAGCTGA 133389 | | | | | | ||||||| ||| |||||| | | | | ||| |||| ||| Sbjct 81467 TAGTAATAGCGCGAGCAATTGATTCCATGTTATCTTCAATTCGTAAAAGATAACA--TGA 81524 Query 133390 --CATACTCCCCTCTTCTAAGTCTACCTGCATTTAAAAAAGTAGGGGTTGCAGGTTGGTA 133447 || || |||||| | | |||||||||||||| || || || || ||||| | Sbjct 81525 AGTGTATTCACCTCTTTGTTTTTTTCCTGCATTTAAAAATGTGGGAGTAGCTGGTTGAAA 81584 Query 133448 TCTAC 133452 ||||| Sbjct 81585 TCTAC 81589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454491173790720