Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq248 104 3e-17 seq726 98.7 1e-15 seq254 98.7 1e-15 seq135 98.7 1e-15 seq842 96.9 4e-15 seq255 96.9 4e-15 >seq248 Length=3919243 Score = 104 bits (114), Expect = 3e-17 Identities = 80/93 (86%), Gaps = 3/93 (3%) Strand=Plus/Minus Query 56998 AAAAATTTTC--TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055 |||||||||| ||| |||| | |||||||||| ||||||||||||||||||||| || Sbjct 3704343 AAAAATTTTCCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 3704284 Query 57056 ACTCACCACTATACTACCGAGG-ATTGAATATA 57087 ||| |||||||||||||||||| |||| |||| Sbjct 3704283 ACTTACCACTATACTACCGAGGAATTGGTTATA 3704251 >seq726 Length=257960 Score = 98.7 bits (108), Expect = 1e-15 Identities = 72/83 (87%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||||| ||||| ||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 231606 AAAAATTCTCTCC--GGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 231663 Query 57058 TCACCACTATACTACCGAGGATT 57080 | |||||||||||||||| |||| Sbjct 231664 TGACCACTATACTACCGAAGATT 231686 >seq254 Length=4355184 Score = 98.7 bits (108), Expect = 1e-15 Identities = 73/84 (87%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 |||||| || ||| |||| | |||||||||| ||||||||||||||||||||| ||| Sbjct 2844537 AAAAATAATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 2844478 Query 57057 CTCACCACTATACTACCGAGGATT 57080 || ||||||||||||||||||||| Sbjct 2844477 CTTACCACTATACTACCGAGGATT 2844454 Score = 98.7 bits (108), Expect = 1e-15 Identities = 73/84 (87%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 |||||| || ||| |||| | |||||||||| ||||||||||||||||||||| ||| Sbjct 2845964 AAAAATAATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 2845905 Query 57057 CTCACCACTATACTACCGAGGATT 57080 || ||||||||||||||||||||| Sbjct 2845904 CTTACCACTATACTACCGAGGATT 2845881 >seq135 Length=928714 Score = 98.7 bits (108), Expect = 1e-15 Identities = 79/94 (84%), Gaps = 1/94 (1%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| |||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 645312 AAAAAATTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 645253 Query 57058 TCACCACTATACTACCGAGGA-TTGAATATATAA 57090 | |||||||||||||||| || || |||| ||| Sbjct 645252 TGACCACTATACTACCGAAGACTTTGATATTTAA 645219 >seq842 Length=91063 Score = 96.9 bits (106), Expect = 4e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| |||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 82625 AAAAAATTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 82566 Query 57058 TCACCACTATACTACCGAGGA 57078 | |||||||||||||||| || Sbjct 82565 TGACCACTATACTACCGAAGA 82545 >seq255 Length=939575 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055 ||| |||||||| | || || || |||||||||||||| | || || | | || Sbjct 827586 CAAAACCAAATGAAGCGTTGATTCTTTCTGAATATTGTAATCGGAAAGCGTTCTTCCATC 827527 Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 || |||||||| ||||| || || | |||||||||||| | ||| | || || ||||| Sbjct 827526 TTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCAGGTGGAATGCCTTCTTTGTC 827467 Query 42116 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 42175 | ||| || |||| | | | || ||| | ||| || |||| ||||| || Sbjct 827466 CTGGATCTTGGCCTTGACATTTTCAATTGTATCGGAAGCTTCAACCTCGAGGGTGATTGT 827407 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || || || ||||| |||||||| ||||| Sbjct 827406 TTTTCCTGTAAGGGTCTTCACAAAGATCTGCAT 827374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543199382643840