Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq295 84.2 2e-11 >seq295 Length=3859974 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 108448 CAGAACACCATCCCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACA-C 108506 |||||||||||| | |||||| ||||| |||| || || || | || || | | Sbjct 811046 CAGAACACCATCTACGACTGGGTGAGGGATCATCGGGTCCATCATAAATTTTCAGAGACC 811105 Query 108507 GACGGCCGACCCACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCAT 108566 ||| ||||| || |||||| |||| | || |||| ||| | ||||| || ||||| || Sbjct 811106 GAC-GCCGATCCGCACAACAGCAACCGCGGCTTCTTCTTCGCTCACGTCGGCTGGCTGAT 811164 Query 108567 GATGACCAAGGACCCCGACGTGATCTCGGC-CGGTCGAAAAATGGACATGACGGACATAT 108625 |||| |||| | ||||| || || ||| | ||||| | | ||||||| |||||| Sbjct 811165 GATGCGCAAGCATCCCGAAGTCAT-TCGCCGAGGTCGGCAGGTCGACATGAGCGACATAC 811223 Query 108626 ACTCCGATCCGGTGGTAGT 108644 | | || || ||||| || Sbjct 811224 TCGCTGACCCCGTGGTCGT 811242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381763605956544