Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq502 89.7 4e-13 >seq502 Length=146425 Score = 89.7 bits (98), Expect = 4e-13 Identities = 116/161 (72%), Gaps = 6/161 (4%) Strand=Plus/Plus Query 7475 GCAATGTTAAACGGTACTCCAAGCATTAGGTCCGCACTGCGTTGATATAATTGTGCCGAT 7534 ||||| ||||| || ||||| || | || ||||| | |||||| | ||| ||| Sbjct 99630 GCAATATTAAATGGCACTCCTAGTCCCATATCAGCACTTCTTTGATAGAGTTGACACGAC 99689 Query 7535 AATTCTCCATTTACAGTATTCACGTGAAATTGTACGAGAATGTGACATGGAGGAAGAGCC 7594 ||||||||||| | | |||| ||||||||||||| |||||||||||| || ||| Sbjct 99690 AATTCTCCATT------ACTAACGTAAAATTGTACGAGACAGTGACATGGAGGCAGTGCC 99743 Query 7595 ATTTTGTCCAAGTCTACCGGATTCCACGCGCTCATTATAAT 7635 ||||| | |||| |||||||| || ||||| ||| Sbjct 99744 ATTTTTGGAATATCTATTGGATTCCATGCAGACATTAAAAT 99784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408233368483136