Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq255 132 5e-26 seq188 96.9 3e-15 >seq255 Length=939575 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | || ||| |||||||| | ||| || ||||| ||||||||||||||| Sbjct 827600 CCTCCGCGAAGTCTCAAAACCAAATGAAGCGTTGATTCTTTCTGAATATTGTAATCGGAA 827541 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| | ||| || ||||| || ||||| |||||||||||||||| || || || Sbjct 827540 AGCGTTCTTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCAGGTGGA 827481 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| || |||||| ||| || ||||| | ||| | || || | | || || Sbjct 827480 ATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTTTCAATTGTATCGGAAGCTTCAACC 827421 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 |||| ||| | ||||| || || || || || ||||| ||||||||| Sbjct 827420 TCGAGGGTGATTGTTTTTCCTGTAAGGGTCTTCACAAAGATCTGCATG 827373 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| || ||||| || ||||| ||| | || | || || || ||||| ||| Sbjct 828026 GTAGATTCCTTTTGGATGTTGTAGTCGGAGAGTGTCCTGCCGTCTTCGAGTTGTTTACCA 827967 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || ||||||| || |||||||| ||||| ||||| || ||||| ||||| |||| Sbjct 827966 GCAAAGATCAAACGTTGCTGATCTGGAGGAATGCCTTCTTTGTCTTGAATTTTGGCCTTG 827907 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | ||| | || || | | || ||||| | || | ||||| || ||||||||| Sbjct 827906 ACATTTTCAATCGTATCTGAAGCTTCTACTTCTAATGTAATGGTTTTCCCAGTCAGAGTT 827847 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 827846 TTCACGAAGATCTGCAT 827830 >seq188 Length=1630868 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | ||||| ||||| ||||||||||| || | || || ||| || Sbjct 124312 ACCAAATGAAGAGTAGATTCTTTCTGAATATTGTAGTCAGATAATGTTCGGCCATCCTCA 124253 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 |||||||||||||| ||||||| | ||||||||| || || || || ||||| | | || Sbjct 124252 AGCTGTTTTCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTAT-CTTG 124194 Query 127025 ATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 | ||| || || | | ||| | ||||| | || ||||| | ||| | || || Sbjct 124193 AATTTTGGCTTTTACATTTTCAATCGTGTCTGAGGCTTCAACTTCAAGGGTGATGGTCTT 124134 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || ||||| || || || |||||||| Sbjct 124133 TCCTGTAAGAGTCTTGACGAATATCTGCAT 124104 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | ||||| ||||| |||||||| || || | || || ||| || Sbjct 123856 ACCAAATGAAGAGTAGATTCTTTCTGAATATTATAGTCAGATAATGTTCGGCCATCCTCA 123797 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 |||||||||||||| ||||||| | ||||||||| || || || || ||||| | | || Sbjct 123796 AGCTGTTTTCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTAT-CTTG 123738 Query 127025 ATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 | ||| || || | | ||| | ||||| | || ||||| | ||| | || || Sbjct 123737 AATTTTGGCTTTTACATTTTCAATCGTGTCTGAGGCTTCAACTTCAAGGGTGATGGTCTT 123678 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || ||||| || || || |||||||| Sbjct 123677 TCCTGTAAGAGTCTTGACGAATATCTGCAT 123648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475489055130240