Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_015251.1 Length=235229 Score E Sequences producing significant alignments: (Bits) Value seq1536 86.0 9e-12 >seq1536 Length=30485 Score = 86.0 bits (94), Expect = 9e-12 Identities = 119/163 (73%), Gaps = 3/163 (2%) Strand=Plus/Plus Query 112208 GTTAGCTCAGTTGGATAGAGCAACGTTCTTCTAAAGCGTGGGTCGCTGGTTCGAATCCAG 112267 ||||||||| |||| |||||| | || ||| | |||| | ||||||| || Sbjct 26415 GTTAGCTCAATTGGC-AGAGCATCAGACTCTTAATCTGAGGGTTGTAGGTTCGAGGCCTA 26473 Query 112268 CACGGCGCACCAAAATTCGGGGATGTGGTGAAATTGGCAGACACACCAGATTTAGGTTCT 112327 |||| |||||||| | || || ||| |||| |||||||| ||||||||||||| ||| Sbjct 26474 TACGGGACACCAAAAATGCGGAAT-TGGCGAAACTGGCAGACGCACCAGATTTAGGCTCT 26532 Query 112328 GGCGCTTATA-GCGTGACGGTTCGAGTCCGTCCATCCCCACCA 112369 ||||| | | || ||| ||||| ||||| | ||| ||||| Sbjct 26533 GGCGCCGAAAGGCATGAGGGTTCAAGTCCCTTGTTCCGCACCA 26575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 752586210661440