Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq764 123 3e-23 >seq764 Length=682507 Score = 123 bits (136), Expect = 3e-23 Identities = 345/521 (66%), Gaps = 24/521 (5%) Strand=Plus/Plus Query 154596 TGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAG 154655 |||| || || || | |||| |||| || |||||||| ||| | |||||||| Sbjct 666054 TGTGCCATTACTGGTTATGATAATATAAGTTTTCAACCTAATAGTGGAGCCCAGGGTGAA 666113 Query 154656 TATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCA---GGAGATGATAAAAGA 154712 ||||| || || |||||| || | | |||| | ||| ||| ||| | | ||| Sbjct 666114 TATGCTGGCTTGAGAGCAATTCAG---TGCTATCATGAATCCCAGGGAAATGCTCACAGA 666170 Query 154713 AATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCA 154772 | || ||| | |||||| || || ||||| || |||||||| ||| |||||| Sbjct 666171 CAAGTTTGTCTTATACCAATATCTGCTCATGGTACAAATCCTGCCTCTGCACAAATGGCA 666230 Query 154773 GGGATGAAAGTTGTAGGTGTCAAGTGTGATG----ATGATGGTAACA-TAGACAT--CAA 154825 || ||| | || | | ||| | | || | ||||| | || | |||| | Sbjct 666231 GGAATGCAGGTGGAAC----CAATTTTTGTGCGTAAGGATGG-ATCAGTGGACACTGCGC 666285 Query 154826 AGATCTA-GAGAAGAA-AGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACA 154883 | | | |||| || | ||| ||| || | | || | || ||| | ||||| ||| Sbjct 666286 ACTTGAACGAGATGATTACCAAGCATAAACAAAATTTA----TCCTGTTTAATGATCACA 666341 Query 154884 TACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCAT 154943 || || || || |||| ||||||||| | || | | | ||| |||| || ||| Sbjct 666342 TATCCTTCGACTAATGGAGTATTTGAAGAGACTATAGGGGACGTGTGTGAGATGGTGCAT 666401 Query 154944 GACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCA 155003 || || || ||||| ||||| ||||| || || | ||||| || |||||||| Sbjct 666402 GAAGCAGGCGGACAGGTGTATCTAGATGGTGCTAACATGAATGCCCAAGTAGGACTTTGT 666461 Query 155004 AAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATT 155063 | ||| |||| |||||| ||||||| ||||| || ||||||||||| || |||||| Sbjct 666462 AGACCTGGTGACTATGGTAGCGATGTATCACATCTTAATTTACATAAAACCTTTTGTATT 666521 Query 155064 CCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 || ||||| || || || ||||| | || || || || || Sbjct 666522 CCTCATGGTGGCGGTGGACCTGGTATGGGACCAATTGGAGT 666562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579198493443840