Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq764 141 1e-28 >seq764 Length=682507 Score = 141 bits (156), Expect = 1e-28 Identities = 349/521 (67%), Gaps = 24/521 (5%) Strand=Plus/Plus Query 159271 TGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAG 159330 |||| || || || | |||| |||| || |||||||| ||| | |||||||| Sbjct 666054 TGTGCCATTACTGGTTATGATAATATAAGTTTTCAACCTAATAGTGGAGCCCAGGGTGAA 666113 Query 159331 TATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCA---GGAGATGATAAAAGA 159387 ||||| || || |||||| || | | |||| | ||| ||| ||| | | ||| Sbjct 666114 TATGCTGGCTTGAGAGCAATTCAG---TGCTATCATGAATCCCAGGGAAATGCTCACAGA 666170 Query 159388 AATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCA 159447 | || ||| | |||||| || || ||||| || |||||||| || ||| |||||| Sbjct 666171 CAAGTTTGTCTTATACCAATATCTGCTCATGGTACAAATCCTGCCTCTGCACAAATGGCA 666230 Query 159448 GGGATGAAAGTTGTAGGTGTCAAGTGTGATG----ATGATGGCAACA-TAGACAT--CAA 159500 || ||| | || | | ||| | | || | ||||| | || | |||| | Sbjct 666231 GGAATGCAGGTGGAAC----CAATTTTTGTGCGTAAGGATGG-ATCAGTGGACACTGCGC 666285 Query 159501 AGATCTA-GAGAAGAA-AGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACA 159558 | | | |||| || | ||| ||| || | | || | || ||| | ||||| ||| Sbjct 666286 ACTTGAACGAGATGATTACCAAGCATAAACAAAATTTA----TCCTGTTTAATGATCACA 666341 Query 159559 TATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCAT 159618 ||||| || || |||| ||||||||| | || | | | ||| |||| || ||| Sbjct 666342 TATCCTTCGACTAATGGAGTATTTGAAGAGACTATAGGGGACGTGTGTGAGATGGTGCAT 666401 Query 159619 GAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCA 159678 || || || ||||| ||||| |||||||| || | ||||| || ||||| || Sbjct 666402 GAAGCAGGCGGACAGGTGTATCTAGATGGTGCTAACATGAATGCCCAAGTAGGACTTTGT 666461 Query 159679 AAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATT 159738 | ||| ||||||||||| ||||||| ||||| || |||||||| || || |||||| Sbjct 666462 AGACCTGGTGACTATGGTAGCGATGTATCACATCTTAATTTACATAAAACCTTTTGTATT 666521 Query 159739 CCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 || ||||| || || || ||||| | || || ||||| || Sbjct 666522 CCTCATGGTGGCGGTGGACCTGGTATGGGACCAATTGGAGT 666562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588036675135360