Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq255 185 7e-42 seq188 176 4e-39 seq771 105 5e-18 seq318 86.0 5e-12 >seq255 Length=939575 Score = 185 bits (204), Expect = 7e-42 Identities = 174/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 |||||| ||||| |||||||| ||||| || ||||| |||| || || ||| | || || Sbjct 827811 AACTAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAGAGTGTCCTGCCGTCTTC 827752 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 | ||| ||||| ||||| |||||||| || ||||| || |||||||||||||||||||| Sbjct 827751 GAGTTGTTTACCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATGCCTTCTTTATCTTG 827692 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || || ||| ||| |||| | ||| || || | ||| ||||| ||||||| ||||| Sbjct 827691 GATCTTAGCTTTAACATTTTCAATAGTATCTGAAGCTTCGACTTCGAGAGTGATGGTTTT 827632 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAG 101481 || ||||| || || ||||| ||||||||| | ||||||| Sbjct 827631 TCCTGTTAAGGTCTTAACAAAAATCTGCATGCCTCCGCGAAG 827590 Score = 154 bits (170), Expect = 1e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 |||||| ||||| |||||||| ||||| || ||||| |||| || || ||| | || || Sbjct 828039 AACTAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAGAGTGTCCTGCCGTCTTC 827980 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 | ||| ||||| ||||| |||||||| || ||||| || |||||||||||||| ||||| Sbjct 827979 GAGTTGTTTACCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATGCCTTCTTTGTCTTG 827920 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 |||||| || ||| |||| | || || || | ||| ||||| | || | ||||| Sbjct 827919 AATTTTGGCCTTGACATTTTCAATCGTATCTGAAGCTTCTACTTCTAATGTAATGGTTTT 827860 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | |||||| || || |||||||| Sbjct 827859 CCCAGTCAGAGTTTTCACGAAGATCTGCAT 827830 Score = 147 bits (162), Expect = 2e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 ||||| |||||||| || |||||||| || ||||||||||||| | ||||| |||| Sbjct 827585 AAAACCAAATGAAGCGTTGATTCTTTCTGAATATTGTAATCGGAAAGCGTTCTTCCATCT 827526 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 |||| ||||| || ||||| ||||| ||||| || || || |||||||||||||| || Sbjct 827525 TCCAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCAGGTGGAATGCCTTCTTTGTCC 827466 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 || || || || ||| |||| | || || || | ||| || || || |||| ||| Sbjct 827465 TGGATCTTGGCCTTGACATTTTCAATTGTATCGGAAGCTTCAACCTCGAGGGTGATTGTT 827406 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTT 101473 || || || | || || ||||| ||||||||| || Sbjct 827405 TTTCCTGTAAGGGTCTTCACAAAGATCTGCATGATT 827370 Score = 140 bits (154), Expect = 3e-28 Identities = 184/254 (72%), Gaps = 2/254 (1%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| || || ||||| | || || |||||||| |||||||| || ||||| ||||| | Sbjct 828452 TTCCACCCCTCAAACGAAGTACCAAGTGAAGGGTTGATTCTTTCTGAATATTATAATCAG 828393 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | || || | || |||| || || || || || || | ||| |||||||| || | Sbjct 828392 AAAGCGTCCTTCCGTCCTCCAGCTGTTTGCCGGCGAAAATTAGACGTTGTTGATCAGGGG 828333 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | ||||||||||| || |||||||| ||| ||| |||| | || || || | ||| | Sbjct 828332 GGATGCCTTCTTTGTCCTGAATTTTAGCTTTGACATTTTCAATCGTATCCGAAGCTTCAA 828273 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAA 101480 |||| ||||||| ||||| || || | ||| || || || |||||||| | |||| Sbjct 828272 CTTCCAGAGTGATAGTTTTCCCAGTGAGAGTCTTCACGAAGATCTGCATACCACCACGAA 828213 Query 101481 GATTTGTAAAACTA 101494 | | ||||||||| Sbjct 828212 G--TCGTAAAACTA 828201 Score = 84.2 bits (92), Expect = 2e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 101255 CGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCA 101314 ||||||||||||||||| || ||||| ||||| |||||||| || | | || | || Sbjct 828210 CGTAAAACTAAATGAAGCGTTGATTCCTTTTGGATATTGTAGTCTGATAGCGTGCGTCCA 828151 Query 101315 TCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAA 101363 || || | ||| ||||| || || |||||||| || ||||| || |||| Sbjct 828150 TCTTCAAGTTGTTTACCAGCGAAGATCAAACGTTGCTGATCTGGAGGAA 828102 >seq188 Length=1630868 Score = 176 bits (194), Expect = 4e-39 Identities = 177/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 101240 TTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCG 101299 ||||| || || | || | |||||| ||||| || ||||||||||| |||||||| || Sbjct 124561 TTTCCACCCCTAAGTCGAAGAACTAAGTGAAGAGTTGATTCTTTTTGGATATTGTAGTCT 124502 Query 101300 GCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGC 101359 | || ||| | |||| || | |||||| || ||||| ||||| | ||| || || || Sbjct 124501 GAGAGAGTACGTCCATCTTCAAGTTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGT 124442 Query 101360 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCC 101419 || || || ||||| ||||||||||| || ||| |||||| |||||||||| || Sbjct 124441 GGGATTCCCTCTTTGTCTTGAATTTTAGCCTTCACATTTTCTATCGTGTCAGACGCCTCA 124382 Query 101420 ACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||| |||| |||||| || ||||| ||||| ||||| |||||||| Sbjct 124381 ACTTCAAGGGTGATCGTTTTACCAGTTAACGTTTTAACAAAGATCTGCAT 124332 Score = 156 bits (172), Expect = 3e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||||||||| ||||| || || || |||||||| | | ||| | | | || || | ||| Sbjct 124079 ATGAAGGGTGGATTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCGTCTTCAAGTTG 124020 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| ||||| | ||| || || || || || |||||||| ||||||||||| Sbjct 124019 CTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGTGGGATTCCTTCTTTGTCTTGAATTTT 123960 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| |||||| ||||| || | || |||||||| |||| ||||||||| || Sbjct 123959 AGCCTTCACATTTTCTATCGTGTCGGATGCCTCAACTTCAAGGGTGATCGTTTTGCCAGT 123900 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 ||| ||||| ||||| |||||||| Sbjct 123899 TAACGTTTTAACAAAGATCTGCAT 123876 Score = 152 bits (168), Expect = 4e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || |||||||| ||||||||||| || |||||||| || | | |||| | |||| || Sbjct 124312 ACCAAATGAAGAGTAGATTCTTTCTGAATATTGTAGTCAGATAATGTTCGGCCATCCTCA 124253 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | || || || ||||| ||||| | ||| ||||| || || || ||||| ||||||||| Sbjct 124252 AGCTGTTTTCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTATCTTGA 124193 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| ||||||| |||| | ||||| || | ||| |||||||| |||| || || Sbjct 124192 ATTTTGGCTTTTACATTTTCAATCGTGTCTGAGGCTTCAACTTCAAGGGTGATGGTCTTT 124133 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | ||| || || ||||||||||| Sbjct 124132 CCTGTAAGAGTCTTGACGAATATCTGCAT 124104 Score = 147 bits (162), Expect = 2e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||||||||| ||||| || || || |||||||| | | ||| | |||| || | ||| Sbjct 123167 ATGAAGGGTGGATTCCTTCTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCAAGTTG 123108 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| ||||| | ||| ||||| || || || ||||| |||||||||||||| Sbjct 123107 CTTTCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTATCTTGAATTTT 123048 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||||||| |||| | ||||| || | ||| |||||||| |||| || || || || Sbjct 123047 GGCTTTTACATTTTCAATCGTGTCTGAGGCTTCAACTTCAAGGGTGATGGTCTTTCCTGT 122988 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | ||| || || ||||||||||| Sbjct 122987 AAGAGTCTTGACGAATATCTGCAT 122964 Score = 147 bits (162), Expect = 2e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||||||||| ||||| || || || |||||||| | | ||| | |||| || | ||| Sbjct 123395 ATGAAGGGTGGATTCCTTCTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCAAGTTG 123336 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| ||||| | ||| ||||| || || || ||||| |||||||||||||| Sbjct 123335 CTTTCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTATCTTGAATTTT 123276 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||||||| |||| | ||||| || | ||| |||||||| |||| || || || || Sbjct 123275 GGCTTTTACATTTTCAATCGTGTCTGAGGCTTCAACTTCAAGGGTGATGGTCTTTCCTGT 123216 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | ||| || || ||||||||||| Sbjct 123215 AAGAGTCTTGACGAATATCTGCAT 123192 Score = 147 bits (162), Expect = 2e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||||||||| ||||| || || || |||||||| | | ||| | |||| || | ||| Sbjct 123623 ATGAAGGGTGGATTCCTTCTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCAAGTTG 123564 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| ||||| | ||| ||||| || || || ||||| |||||||||||||| Sbjct 123563 CTTTCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTATCTTGAATTTT 123504 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||||||| |||| | ||||| || | ||| |||||||| |||| || || || || Sbjct 123503 GGCTTTTACATTTTCAATCGTGTCTGAGGCTTCAACTTCAAGGGTGATGGTCTTTCCTGT 123444 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | ||| || || ||||||||||| Sbjct 123443 AAGAGTCTTGACGAATATCTGCAT 123420 Score = 147 bits (162), Expect = 2e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || |||||||| ||||||||||| || ||||| || || | | |||| | |||| || Sbjct 123856 ACCAAATGAAGAGTAGATTCTTTCTGAATATTATAGTCAGATAATGTTCGGCCATCCTCA 123797 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | || || || ||||| ||||| | ||| ||||| || || || ||||| ||||||||| Sbjct 123796 AGCTGTTTTCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTATCTTGA 123737 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| ||||||| |||| | ||||| || | ||| |||||||| |||| || || Sbjct 123736 ATTTTGGCTTTTACATTTTCAATCGTGTCTGAGGCTTCAACTTCAAGGGTGATGGTCTTT 123677 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | ||| || || ||||||||||| Sbjct 123676 CCTGTAAGAGTCTTGACGAATATCTGCAT 123648 Score = 141 bits (156), Expect = 7e-29 Identities = 156/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||||||||| ||||| || || || |||||||| | | ||| | |||| || | ||| Sbjct 122939 ATGAAGGGTGGATTCCTTCTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCAAGTTG 122880 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| ||||| | ||| ||||| || || || ||||| |||||||||||||| Sbjct 122879 CTTTCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTATCTTGAATTTT 122820 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||||||| |||| | || ||||| | || || ||||| |||| || || || || Sbjct 122819 GGCTTTTACATTTTCAATCGTATCAGATGCCTCAACCTCAAGGGTGATGGTCTTCCCAGT 122760 Query 101446 TAAAGTTTTTACAAATATCTGCATGGTT 101473 ||||| || || || ||||||||| || Sbjct 122759 CAAAGTCTTCACGAAAATCTGCATGATT 122732 >seq771 Length=410761 Score = 105 bits (116), Expect = 5e-18 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 101282 TTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATC 101341 || || ||||| || |||| | || | |||| |||| ||||| || || || || Sbjct 282890 TTCTGGATATTATAGTCGGATAATGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATA 282949 Query 101342 AAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCT 101401 | |||||||||||| || || || ||||| |||||||| || || || ||| ||||| Sbjct 282950 AGACGCTGTTGATCCGGAGGGATACCTTCCTTATCTTGGATCTTGGCCTTCACATTTTCT 283009 Query 101402 ACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAAT 101461 | ||| || || | || || ||||| |||| || ||||| |||| || || ||||| Sbjct 283010 ATAGTATCGGAAGCCTCAACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTCACAAAG 283069 Query 101462 ATCTGCAT 101469 |||||||| Sbjct 283070 ATCTGCAT 283077 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339 |||| || || || || |||| | || | |||| |||| ||||| || || || | Sbjct 280041 CTTTCTGGATGTTATAGTCGGATAATGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGA 280100 Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399 | | |||||||||||| || || || ||||| || ||||| || || |||||| ||| Sbjct 280101 TAAGACGCTGTTGATCCGGAGGGATACCTTCCTTGTCTTGGATCTTGGCCTTTACATTTT 280160 Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459 | | ||| || || | || || ||||| |||| || ||||| |||| || || || | Sbjct 280161 CAATAGTATCGGAAGCCTCAACCTCAAGGGTGATAGTCTTGCCCGTTAGGGTCTTCACGA 280220 Query 101460 ATATCTGCATGGT 101472 | |||||||| || Sbjct 280221 AGATCTGCATTGT 280233 >seq318 Length=1430473 Score = 86.0 bits (94), Expect = 5e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 101366 CCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCA 101425 ||||||||||||||||||||| ||| ||| |||| | ||| || | | ||| || ||| Sbjct 731108 CCTTCTTTATCTTGAATTTTTGCTTTGACATTTTCAATAGTATCCGCAGCTTCGACCTCA 731049 Query 101426 AGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || |||| || || || ||||| ||||| || || ||||||||| Sbjct 731048 AGGGTGATGGTCTTCCCAGTTAACGTTTTCACGAAAATCTGCATG 731004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396268856625432