Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq904 105 9e-18 >seq904 Length=1011748 Score = 105 bits (116), Expect = 9e-18 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 197083 GGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTG 197142 |||| ||||| || | ||| || | || |||||||| ||||| || || || || Sbjct 184897 GGATCATAACAAGCCAATAAAAATCCTCCATAGGTTCCTGTTCTTTTCCCTTTTCCTATG 184838 Query 197143 AAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTC 197202 | || || || || || || || || ||||||| || ||||| | |||||||||||| Sbjct 184837 TAACCACCAATTACAACAAGGTCTAGGGTGTCGCCAACACCTTCTAGATAATCTTTCTTC 184778 Query 197203 AGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTC 197262 ||||| ||||| | | ||||||||||| || || || || || | | || || ||| Sbjct 184777 AGTTTCAGCCAATTGCGCGATCTCTTGGCTATTTCATACGTCGCATCCTCATCAAGAGTC 184718 Query 197263 TTGATCATCAATCCCTCGCAATCTTCCT 197290 || | ||| | |||||||||| ||||| Sbjct 184717 TTAACCATTAGACCCTCGCAAT-TTCCT 184691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676712884778880