Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq1536 120 7e-22 >seq1536 Length=30485 Score = 120 bits (132), Expect = 7e-22 Identities = 281/418 (67%), Gaps = 11/418 (3%) Strand=Plus/Plus Query 133904 TTGAAAAATAATCCTGATTCTCGACGTCATATTCTAACTGCATGGAATGTTGGTGAACTA 133963 || ||||| |||||| ||| ||| | || ||| || | ||||| ||| || ||| | Sbjct 6807 TTAAAAAACAATCCTTTTTCACGAAGACACATTTTATCAGCATGAAATCCTGCAGAAATT 6866 Query 133964 GATAAAATGACTTTGCCACCATGTCATTGCTTTAGTCAATTCTTCGTAAATGACGGTAAG 134023 | || ||| | | |||||||||||| || | |||||| | ||| ||| | ||| Sbjct 6867 AAAAATATGGCACTACCACCATGTCATACTTTAATTCAATTTTACGTTTCTGATGATAAA 6926 Query 134024 ---TTATCATGTATTCTATATCAACGTAGCTGTGATCTATTCTTAGGAGTACCATTCAAC 134080 ||||| ||| ||||||||||||| ||| | || |||||||| || || || Sbjct 6927 AAATTATCTTGTCAATTATATCAACGTAGTGCAGATATTTTTTTAGGAGTTCCTTTTAAT 6986 Query 134081 ATTGCTTCATATTCATTACTAACTCATATGTTAGCACAAGTTTGTGGGTTAGAAGTTGGT 134140 |||||||| ||| ||||| |||| |||||||||||| | ||| || || || | | Sbjct 6987 ATTGCTTCTTATGCATTATTAACAATAATGTTAGCACAAATATGT-GGCTATCAGCTAG- 7044 Query 134141 GAGTTTGTATGGATGGGT--GGAGATGTTCACATTTATAAAAATCACGTAGAAGCAGTTC 134198 ||| | ||| || | || |||| ||| ||||||| ||||| | | | || Sbjct 7045 GAGAATTTATTCATACTTTAGGTGATGCTCATATTTATAGTAATCATTTTTCACAAATTA 7104 Query 134199 AGGAACAACTTTCACGTGAACCTAAAGAATTACCAACTCTTTGGATTGATACTAGTATTA 134258 | |||||| | | |||| ||| ||| |||| | | ||| ||| | ||||| Sbjct 7105 ATGAACAATTAAGTAGAAAACCAAAATCATTGCCAATTTTAGTTATTAATAAAAATATTA 7164 Query 134259 CTGA--TATTAAAGATTTCACAATGGAATCTTTTAAATTGGAAAATTATAATCCAGAT 134314 || | |||| | |||| | | | ||| ||||||||| ||| | ||| ||||| || Sbjct 7165 CTAATTTATTTA--ATTTTAAATTTGAAGATTTTAAATTAGAACAATATGATCCATAT 7220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147561345880048