Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_019909.1 Length=168809 Score E Sequences producing significant alignments: (Bits) Value seq1536 91.5 2e-13 >seq1536 Length=30485 Score = 91.5 bits (100), Expect = 2e-13 Identities = 149/210 (71%), Gaps = 6/210 (3%) Strand=Plus/Minus Query 148998 AACATTTGTAGAGCCAGACATAAACCATAATAATTCA-GAA--ATACAAGCTTTCCATGC 149054 || ||| ||| |||| ||||| |||||||| ||| ||| ||| |||| ||| Sbjct 6587 AATATTAGTATCACCAGCAATAAATCATAATAACTCATGAACAATAGAAGCAAA--ATGA 6530 Query 149055 TAGTTTTTTAGTAGTAATTGCTGGAAAACCTTTTTGTAAATCAAACCTTAATTGTGTGCC 149114 | |||||| ||||| | | ||||||||||||||||||||||| | | ||| || Sbjct 6529 -ACTTTTTTTGTAGTTAATATGGGAAAACCTTTTTGTAAATCAAAACGCATTTGATAACC 6471 Query 149115 AAATACTGCAATAGTACCAGTTCCAGTACGATCATCAGTTTGATAGCCGCTTTCAAAAAT 149174 ||| | || ||||||||| || || | |||| | ||| ||| || |||| |||| Sbjct 6470 AAAAGTAGAAACAGTACCAGTGCCTGTTCTATCAGCTTTTTTATATCCTTTTTCTAAAAC 6411 Query 149175 ATGTTTAATTAGATCTTGATATTGTTTCAT 149204 || || | || |||| |||||||||||| Sbjct 6410 ATATTGACATAAATCTAAATATTGTTTCAT 6381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540047460498240