Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq764 167 3e-36 >seq764 Length=682507 Score = 167 bits (184), Expect = 3e-36 Identities = 352/518 (68%), Gaps = 18/518 (3%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||| || || | ||||| || || || ||||| |||||||| || || |||||| Sbjct 666562 ACTCCAATTGGTCCCATACCAGGTCCACCGCCACCATGAGGAATACAAAAGGTTTTATGT 666503 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 ||||| ||||| ||||||| ||||||||||| ||| | || ||||| || ||| Sbjct 666502 AAATTAAGATGTGATACATCGCTACCATAGTCACCAGGTCTACAAAGTCCTACTTGGGCA 666443 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || |||||||| ||||| ||||| || || ||||| || |||| ||| | Sbjct 666442 TTCATGTTAGCACCATCTAGATACACCTGTCCGCCTGCTTCATGCACCATCTCACACACG 666383 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 | | || | ||||||||| |||| |||||| |||||||| ||||| | ||| || Sbjct 666382 TCCCCTATAGTCTCTTCAAATACTCCATTAGTCGAAGGATATGTGATCATTAAACAGGA- 666324 Query 138423 AGTTCAAATGTATTCATGATTGCT-TTCTTCTC-TAGATCTTTG--ATGTCTA-TGTTGC 138477 | || | | || ||| ||| | || |||| | | | | |||| | || | | Sbjct 666323 ---TAAATTTTGTTTATGCTTGGTAATCATCTCGTTCAAGTGCGCAGTGTCCACTGAT-C 666268 Query 138478 CATCAT----CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCA 138533 |||| | || | | ||| | | || | |||||||||||| |||| ||| Sbjct 666267 CATCCTTACGCACAAAAATTG----GTTCCACCTGCATTCCTGCCATTTGTGCAGAGGCA 666212 Query 138534 GGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATCTCCTGAT 138593 ||||| || ||||| || || |||||| ||||| || | ||| | | ||| ||| Sbjct 666211 GGATTTGTACCATGAGCAGATATTGGTATAAGACAAACTTGTCTGTGAGCATTTCCCTGG 666152 Query 138594 CCTTGATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTA 138653 || |||||| || |||||| || || ||||| |||||||| | ||| ||| Sbjct 666151 GATTCATGATAGCACTGAATTGCTCTCAAGCCAGCATATTCACCCTGGGCTCCACTATTA 666092 Query 138654 GGTTGTAATGATATAGAATCAAAACCTGTGATATCACA 138691 ||||| || |||| |||| |||| || || |||| Sbjct 666091 GGTTGAAAACTTATATTATCATAACCAGTAATGGCACA 666054 Score = 87.8 bits (96), Expect = 2e-12 Identities = 172/247 (70%), Gaps = 8/247 (3%) Strand=Plus/Minus Query 139271 ACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGAT 139330 ||||||||| ||||||| | ||||||| || || | | ||||||||| ||||| || Sbjct 665293 ACCATGATAGACTGCATACATGGCAGACATGTTCGCCAATAATGCTTGTGCCGTGCAAAT 665234 Query 139331 GTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTA 139390 |||||||||||||| || | | |||||| || || | |||||| || || | | || Sbjct 665233 ATTACTGGTTGCTTTATCACGACGAATATGTTGTTCCCGAGTTTGAAGAGCGAGACGATA 665174 Query 139391 TGC-AGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCT 139449 ||| | || | || || ||| || ||| | ||||| ||||| | || | Sbjct 665173 TGCGTCGTTTCCATTAGC-GTCTCTCGATACACCAATCATTCTACCAGGCA--TTAGACG 665117 Query 139450 TA-TACTTGTCTGTTG--TTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAA 139506 || || || | || | ||||||||| | |||||||| || || ||||| | ||||| Sbjct 665116 TACTAATT-TTTGACGACATGCAAAGAAACCTGCATGAGGTCCACCATATCCTAGAGGAA 665058 Query 139507 TACCAAA 139513 |||||| Sbjct 665057 CACCAAA 665051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578984098739520