Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq623 86.0 8e-12 >seq623 Length=824895 Score = 86.0 bits (94), Expect = 8e-12 Identities = 155/225 (69%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 47850 ATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTC 47909 |||||| | ||||||||||| ||||| | ||| | ||| |||| | || | || Sbjct 561329 ATAATCCTTCGCATGTCCCCAATCACGTTTAGAATCTAAATTGCCTAACTCTAGAACTTC 561270 Query 47910 TTGCTTACCTTCAGAGATTGCTTTTAA--TGCTCTTGTAATCTTACGAGTTACAAAAGTT 47967 ||| ||| ||| | ||| || || |||||| ||||| | || |||||| || Sbjct 561269 TTGAAGGCCT--AGATGTATCTTAGAAACTGATCTTGTGATCTTTCTCGTAACAAAATTT 561212 Query 47968 TCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTAT 48027 || || | || |||| ||||||||||| | || ||| |||| |||||||| ||| Sbjct 561211 TCTCCTCTTCGTGGACTCTCATGATTAAATAATATTCCATTACAAGCATACATATTGTAA 561152 Query 48028 GATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCA 48072 | ||| | ||||| | || |||||| | ||||| | ||| ||| Sbjct 561151 GCTTCTCTGTAGTTTATCACAATCCAGAATCCATACATTTTAGCA 561107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665477962288320