Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq502 102 1e-16 >seq502 Length=146425 Score = 102 bits (112), Expect = 1e-16 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 172401 GAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 172460 ||| | |||||| |||| | ||| || ||| || | ||| || | || ||||||| Sbjct 100118 GAATTATTATGGTTTATCAGAGGATCGACTAATGCTAAAGAACTGTCAAGTAAAGGTGTT 100059 Query 172461 AAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGA 172520 | ||||| ||| ||| |||| ||||||||| || ||| || || | | ||| || Sbjct 100058 CATATTTGGGATGCAAATAGTTCACGTGAATTTCTAAATTCCTGTGGCTATGATGACAGG 99999 Query 172521 AAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATAT 172580 | ||||||||| | || || ||||||||||||||||| || || || || || ||| Sbjct 99998 GAGGAAGGTGATCTCGGTCCTGTTTATGGATTTCAATGGCGAAATTTTGGTGCACAGTAT 99939 Query 172581 ATCGACTGTG-ATACAGATTACACAGGACAAGG 172612 ||||| | || | || ||||| |||| ||||| Sbjct 99938 ATCGA-TATGAACACTGATTATTCAGGGCAAGG 99907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632473977506880