Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq502 86.0 8e-12 >seq502 Length=146425 Score = 86.0 bits (94), Expect = 8e-12 Identities = 98/129 (76%), Gaps = 7/129 (5%) Strand=Plus/Minus Query 180731 CCAGATATGGCTCTTCCACCATGTCACTGTTTGGTACAATTTTATGTTAGAAAT--AAAA 180788 ||| | ||||| || || |||||||||||| | ||||||||||| ||||| ||| | || Sbjct 99751 CCAAAAATGGCACTGCCTCCATGTCACTGTCTCGTACAATTTTACGTTAGTAATGGAGAA 99692 Query 180789 TTTATTTAGATTGCCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATATA 180848 | | | | || ||| | ||||||||| ||| ||| | ||| |||| || |||| || Sbjct 99691 T---TGTCG--TGTCAACTCTATCAAAGAAGTGCTGATATGGGACTAGGAGTGCCATTTA 99637 Query 180849 ATATTGCTT 180857 ||||||||| Sbjct 99636 ATATTGCTT 99628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655263814584000