Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq285 100 9e-18 seq219 100 9e-18 seq254 98.7 3e-17 seq805 95.1 4e-16 seq200 95.1 4e-16 >seq285 Length=1349629 Score = 100 bits (110), Expect = 9e-18 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 1276994 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAAT 1276935 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 1276934 CCCGGGTTTCGGC 1276922 >seq219 Length=3408353 Score = 100 bits (110), Expect = 9e-18 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| |||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 1165207 ATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCA 1165148 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 1165147 ATCCCGGGTTTCGGC 1165133 >seq254 Length=4355184 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 3897247 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 3897188 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 3897187 CCGGGTTTCGGC 3897176 >seq805 Length=1297152 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||| ||||||| | Sbjct 490248 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCAATC 490189 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 490188 CCGGGTTTCGGC 490177 >seq200 Length=2828343 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||| ||||| ||||||| | Sbjct 2343666 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCAATC 2343607 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 2343606 CCGGGTTTCGGC 2343595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15849257450520