Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_027341.1 Length=130008 Score E Sequences producing significant alignments: (Bits) Value seq1322 84.2 2e-11 >seq1322 Length=110664 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 69047 GGAGTTGTTCCAATCATGAAACTCTATGAAGATTCATTTTCATATGCCAATCAGTTGGGG 69106 || ||| | ||| | |||||| | ||||||||||||||||||||| ||||| | || Sbjct 81365 GGCGTTATCCCAGTTATGAAAATTCTTGAAGATTCATTTTCATATGCTAATCAACTAGGT 81306 Query 69107 ACAAGAAATGGGGCAGGAGTAACTTATCTCAATGTATTCCATAAAGATATTGTTAAATTC 69166 |||| | || || || | | |||| | ||||| ||| ||||||| | ||| Sbjct 81305 CAAAGACAAGGTGCTGGGGCAGTTTATTTAAATGTTCATCATCCAGATATTATGTTATTT 81246 Query 69167 CTCTCTACaaaaaaaGAAAATGCTGACGAAAAAGTTCGTGTTAAAACTCTTTCTCTCGGT 69226 | | |||| |||||||| || |||||| ||||| ||||| | | ||| | || Sbjct 81245 TTAGATTCAAAGCGTGAAAATGCAGATGAAAAAATTCGTATTAAATCAATGTCTTTAGGA 81186 Query 69227 GTTGTAGTTCCTGATA 69242 || || ||||||||| Sbjct 81185 GTAGTTATTCCTGATA 81170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415890784068984