Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_028855.1 Length=44846 Score E Sequences producing significant alignments: (Bits) Value seq1517 91.5 4e-14 >seq1517 Length=17455 Score = 91.5 bits (100), Expect = 4e-14 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 30307 TTTTTATCATAATACTCATCACGATATATAAACATGATCACATCTGCGTCCTCTTCAATA 30366 |||| | |||||| ||||||||||||| |||||| || ||||| || || | ||||||| Sbjct 12135 TTTTCCTTATAATAATCATCACGATATAAAAACATAATTACATCAGCATCTTGTTCAATA 12076 Query 30367 GATCCCGACTCACGAATGTCAGACATTAGAGGTCGTCTATCTT 30409 | || |||||||| | |||||||||| ||| ||| | |||| Sbjct 12075 GCCCCTGACTCACGTAAATCAGACATTAAAGGACGTTTTTCTT 12033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143382235456896