Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq1536 178 1e-39 >seq1536 Length=30485 Score = 178 bits (196), Expect = 1e-39 Identities = 216/290 (74%), Gaps = 7/290 (2%) Strand=Plus/Minus Query 126080 ATGATTGGAATAAATATGTGCATCTCCAAATGTATGAATGAATTCACCCACCTCAAGTCC 126139 |||||| ||||||||| ||||| || || |||||||| ||||| || | || | || Sbjct 7091 ATGATTACTATAAATATGAGCATCACCTAAAGTATGAATAAATTCTCCTAGCTGATAGCC 7032 Query 126140 ACATTCTTTTGC-AACAAGATGTGTCAGTAAAGCATAACTTGCAATATTGAAAGGAACAC 126198 |||| || ||| |||| || ||| | ||| |||||| |||||||| |||||||| | Sbjct 7031 ACATATTTGTGCTAACATTAT-TGTTAATAATGCATAAGAAGCAATATTAAAAGGAACTC 6973 Query 126199 CTAAAAATATATCAGCACTTCTTTGATATAATTGACAATTTAA---TTTACCCTCTTGTA 126255 ||||||| ||||| ||||| | |||||||||||||||| ||| |||| | || | Sbjct 6972 CTAAAAAAATATCTGCACTACGTTGATATAATTGACAAGATAATTTTTTATCATCAGAAA 6913 Query 126256 CGTAAAATTGAAACATTGTGTGGCAAGGTGGTAATGCCATTGAATCGATTTCAGTAGGAT 126315 |||||||||||| | || || || ||||||| |||||| | ||||| | ||||| Sbjct 6912 CGTAAAATTGAATTAAAGTATGACATGGTGGTAGTGCCATATTTTTAATTTCTGCAGGAT 6853 Query 126316 TCCATGCTGAAACAATGTGACGTCGAGAGTTTGGATTGGTTTT--AATTT 126363 | |||||||| | |||||| | ||| || |||||| |||| ||||| Sbjct 6852 TTCATGCTGATAAAATGTGTCTTCGTGAAAAAGGATTGTTTTTTAAATTT 6803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408588559929032