Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq502 89.7 5e-13 >seq502 Length=146425 Score = 89.7 bits (98), Expect = 5e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 |||||| || | ||| || || |||| || ||| |||||| || || ||||| |||| Sbjct 99593 GACATGTGCCAGCATATAAGTAAGCAAAGAGTACGAAGCAATATTAAATGGCACTCCTAG 99652 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 ||||| || | || ||||||||| || || |||| || ||||| ||||| || Sbjct 99653 TCCCATATCAGCACTTCTTTGATAGAGTTGACACGACAATTCTCCATTACTAACGTAAAA 99712 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGC 6795 ||| ||| ||| || || || || ||||| || | ||| | || ||||| || Sbjct 99713 TTGTACGAGACAGTGACATGGAGGCAGTGCCATTTTTGGAATATCTATTGGATTCCATGC 99772 Query 6796 GCACATCACGATCCTTCTGTCATCAGG 6822 |||| | |||||||||||||| || Sbjct 99773 AGACATTAAAATCCTTCTGTCATCTGG 99799 Score = 89.7 bits (98), Expect = 5e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 34523 CCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCG 34582 || |||||||||||||| | |||| || ||||| || | ||| | || ||||| Sbjct 99799 CCAGATGACAGAAGGATTTTAATGTCTGCATGGAATCCAATAGATATTCCAAAAATGGCA 99740 Query 34583 CTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAG 34642 || || || || ||| ||| ||||| ||||| ||||| || |||| || || Sbjct 99739 CTGCCTCCATGTCACTGTCTCGTACAATTTTACGTTAGTAATGGAGAATTGTCGTGTCAA 99680 Query 34643 CTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCT 34702 ||||||||| || | || ||||| |||| ||||| || || |||||| ||| || Sbjct 99679 CTCTATCAAAGAAGTGCTGATATGGGACTAGGAGTGCCATTTAATATTGCTTCGTACTCT 99620 Query 34703 CTGCTCACGTACATGATCGCTCATGTC 34729 |||| || || ||| | || |||||| Sbjct 99619 TTGCTTACTTATATGCTGGCACATGTC 99593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448251327918720