Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq255 104 2e-17 >seq255 Length=939575 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 39073 AACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCA 39132 || |||||||| ||||| ||||| || ||||| ||||||| ||| |||| | | || Sbjct 827585 AAAACCAAATGAAGCGTTGATTCTTTCTGAATATTGTAATCGGAAAGCGTTCTTCCATCT 827526 Query 39133 TCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCC 39192 || ||||| ||||| ||||| || | ||||||||||| | || | || ||||||||| Sbjct 827525 TCCAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCAGGTGGAATGCCTTCTTTGTCC 827466 Query 39193 ATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTT 39252 ||| || |||| | | | |||||| | || || || | ||||| || Sbjct 827465 TGGATCTTGGCCTTGACATTTTCAATTGTATCGGAAGCTTCAACCTCGAGGGTGATTGTT 827406 Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || || || |||||||| ||||| Sbjct 827405 TTTCCTGTAAGGGTCTTCACAAAGATCTGCAT 827374 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || || || || || | ||||| || || || ||||| || ||||||||||| | | Sbjct 828450 CCACCCCTCAAACGAAGTACCAAGTGAAGGGTTGATTCTTTCTGAATATTATAATCAGAA 828391 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || | | |||| || ||||||||||| || || || ||||| || || || | ||| Sbjct 828390 AGCGTCCTTCCGTCCTCCAGCTGTTTGCCGGCGAAAATTAGACGTTGTTGATCAGGGGGG 828331 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||||||||| ||||| ||||| | | | |||||| | || || Sbjct 828330 ATGCCTTCTTTGTCCTGAATTTTAGCTTTGACATTTTCAATCGTATCCGAAGCTTCAACT 828271 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| |||||| |||| || || || || || || ||||| ||||| Sbjct 828270 TCCAGAGTGATAGTTTTCCCAGTGAGAGTCTTCACGAAGATCTGCAT 828224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429535255468088