Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq211 165 7e-36 >seq211 Length=255845 Score = 165 bits (182), Expect = 7e-36 Identities = 304/442 (69%), Gaps = 14/442 (3%) Strand=Plus/Minus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 || |||||| ||| | |||||| || || | ||| ||||| | ||| | || || Sbjct 252222 TCATCTCTGGAAATTAATTCGTTGCTGAATGTAAGTCCAGGCATGATACCACGTTTCTTC 252163 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 |||||||| ||||| || || ||| ||||| || |||||||| || || ||||| Sbjct 252162 AGCCAAAAGATAGCAGCGAAACTACCACTGAAGAAGATTCCTTCTACCGCTGCGAACGCA 252103 Query 4692 ACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTT---AATCCATTTTAATGCCCAGTTA 4748 | | || | || | | ||| |||| | |||||| ||||| ||||| || Sbjct 252102 ATCACACGTTCTGCAAAAG---TTGCTGTGTCATGCGAAATCCAATTTAAGGCCCAATTG 252046 Query 4749 GCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATA---ATTTACTTTTTTCA 4805 |||||||| |||||| |||| | | || || || || | | | || | ||| Sbjct 252045 GCTTTTTTAGCAACGCAGGGAAGATTCTCGATGGCATTGAAGAGAAAATCCCTCTCTTCG 251986 Query 4806 A-ATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTC 4864 || | ||||| |||| ||| || ||| ||||||||| || |||| |||||| Sbjct 251985 GCATTACTGATGAAT----GTGTTTATAAGGAGGGAATACATTTCTGAGTGTACATTTTC 251930 Query 4865 TATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAA 4924 || || || ||||| || || ||||| | ||||| |||||||| ||||| | || || Sbjct 251929 AATTGCTATTTGAAAACCATAGAAGCACCGTGCTTCCGTTACTTGGACTTCTTGACTGAA 251870 Query 4925 TCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATG 4984 | |||||||| || || || || ||||| || ||||||||||||||||| ||||| Sbjct 251869 CCGTTCTACTAGATTCTCATTGACAATACCATCTGATGCTGCAAAAAACGCCAATACATG 251810 Query 4985 AGATATAAAGTACTGTTCGTCA 5006 |||||||| | |||||||| Sbjct 251809 GGATATAAAATGACGTTCGTCA 251788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427039315578008