Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_031042.1 Length=111325 Score E Sequences producing significant alignments: (Bits) Value seq1536 84.2 2e-11 >seq1536 Length=30485 Score = 84.2 bits (92), Expect = 2e-11 Identities = 190/284 (67%), Gaps = 4/284 (1%) Strand=Plus/Minus Query 14805 TGTTAATAAAGCATAACTAGCAATATTGAAAGGTAGGCCTAGAAAACAGTCTACAGAACG 14864 ||||||||| |||||| ||||||||| ||||| | |||| |||| ||| || ||| Sbjct 7010 TGTTAATAATGCATAAGAAGCAATATTAAAAGGAACTCCTAAAAAAATATCTGCACTACG 6951 Query 14865 TTGTGTCCATTTAAGATCTAAGTATCCATCATTACTTACGTAACACTGGAAACCATAGT- 14923 ||| ||| | | ||| | | ||||| | |||||| | || || | ||| Sbjct 6950 TTGATATAATTGACAAGATAATTTTTTATCATCAGAAACGTAAAATTG--AATTAAAGTA 6893 Query 14924 -GACATGGTGGTAATGCCATCTTATCCAATTCAGCAACGTTCCATGCGGATACTAGGTGT 14982 |||||||||||| |||||| || | | ||| ||| || ||||| |||| | |||| Sbjct 6892 TGACATGGTGGTAGTGCCATATTTTTAATTTCTGCAGGATTTCATGCTGATAAAATGTGT 6833 Query 14983 CTACGACCATGTGGATTATTCTTGAGACCCTCAATGAGTTCTAGAATCTGATCTCGTCCG 15042 || || | ||||| || || | | || || | || | | ||||| || Sbjct 6832 CTTCGTGAAAAAGGATTGTTTTTTAAATTTTCTATTAACTCCTGCAATTGATCAACACCA 6773 Query 15043 CCAAAGTTACGCCACTGTTTACCATATACTGGTCCTAGATTACC 15086 ||| ||||| || ||| ||||||| || ||||||| || ||| Sbjct 6772 TTAAAATTACGTCATTGTCTACCATAAACAGGTCCTAAATCACC 6729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356106623855696