Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq211 102 8e-17 >seq211 Length=255845 Score = 102 bits (112), Expect = 8e-17 Identities = 297/453 (66%), Gaps = 12/453 (3%) Strand=Plus/Minus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| || ||| ||||| || ||||| | ||| ||||| | || ||||| || Sbjct 252222 TCATCTCTGGAAATTAATTCGTTGCTGAATGTAAGTCCAGGCATGATACCACGTTTCTTC 252163 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | |||||| || ||||| || || ||||| || || || || || || || || Sbjct 252162 AGCCAAAAGATAGCAGCGAAACTACCACTGAAGAAGATTCCTTCTACCGCTGCGAACGCA 252103 Query 23653 ACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCC 23712 | | |||| |||| ||||| | | || |||||||| ||| | |||||| || Sbjct 252102 ATCACACGTTCTGCAAAAGTTGCTGTGTCATGCGAAATCCAATTTAAGGCCCAATTGGCT 252043 Query 23713 TTCAATTTTACA---CACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTC- 23768 || ||| || || || | || || || || ||||||||| | ||||| Sbjct 252042 TT---TTTAGCAACGCAGGGAAGATTCTCGATGGCATTGAAGAGAAAATCCCTCTCTTCG 251986 Query 23769 --ATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCA 23826 |||| ||| | || ||| | || || | ||||||||| || || | ||||||| Sbjct 251985 GCATTA-CTGATGAATGTGTTT--ATAAGGAGGGAATACATTTCTGAGTGTACATTTTCA 251929 Query 23827 ATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAAT 23886 || || || ||||| ||||| || || | ||||| | | ||| || || | | || Sbjct 251928 ATTGCTATTTGAAAACCATAGAAGCACCGTGCTTCCGTTACTTGGACTTCTTGACTGAAC 251869 Query 23887 CTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATAT 23946 | || ||| ||| || || ||||||||||| || ||||| || || | |||| Sbjct 251868 CGTTCTACTAGATTCTCATTGACAATACCATCTGATGCTGCAAAAAACGCCAATACATGG 251809 Query 23947 TTTATAAAATGTCTTTCATCAGTTGATAATTTT 23979 ||||||||| | ||| ||| || ||| ||| Sbjct 251808 GATATAAAATGACGTTCGTCATCTGTTAACTTT 251776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521475119246400