Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq1536 87.8 2e-12 >seq1536 Length=30485 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/203 (70%), Gaps = 5/203 (2%) Strand=Plus/Plus Query 50665 TACCTCCGTGTCATGTTTTATGTCAATTTTATGCCACAGACAATGTT---TTATCCTGTC 50721 |||| || |||||| |||| ||||||||| | | || || ||||| |||| Sbjct 6880 TACCACCATGTCATACTTTAATTCAATTTTACGTTTCTGATGATAAAAAATTATCTTGTC 6939 Query 50722 AATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACG 50781 ||| |||||| | || ||||| |||||| |||||||| || | |||||||| | Sbjct 6940 AATTATATCAACGTAGTGCAGATATTTTTTTAGGAGTTCCTTTTAATATTGCTTCTTATG 6999 Query 50782 CTTTATTAACGTATTTGATCGCTCAAGCC-GTCGATATGAAACCGGGAGAATTTATTCAT 50840 | |||||||| || | || ||| || | ||| | | ||||||||||||||| Sbjct 7000 CATTATTAACAATAATGTTAGCACAAATATGTGGCTATCAG-CTAGGAGAATTTATTCAT 7058 Query 50841 ACGTTAGGAGACGCTCATATTTA 50863 || ||||| || ||||||||||| Sbjct 7059 ACTTTAGGTGATGCTCATATTTA 7081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667058723242560