Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq48246 116 4e-21 >seq48246 Length=3565318 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || || || ||||| | ||| ||||||||||||||| | |||||| || |||| ||| Sbjct 2532214 ATGTATGTGTCAATTAATAAGGAGTACATTTCTGAGTGCACGTTCTCCATCGCTACTTGA 2532273 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || |||||||| || || ||||| | | ||| ||||| | ||||||||| | || Sbjct 2532274 AAGCCATAGAAACAGCGTGCCTCTGTCACTTGAACTTCTTGGCTAAATCGTTCTACGAGA 2532333 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651 |||||||| ||||||||||| ||| || || || || |||| |||| || || | | Sbjct 2532334 TTCTCATTAACGATACCGTCGGATGCCGCGAAGAATGCTAATACGTGCGATATAAAGTGT 2532393 Query 16652 TTTTCGTCAGATGTAAGAATATGCCAATC 16680 || ||| || | | ||||| ||| || Sbjct 2532394 TTCTCGCTAGCGTTTAAAATATCCCAGTC 2532422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511091134957760