Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_001317.1 Length=30624 Score E Sequences producing significant alignments: (Bits) Value seq16755 84.2 4e-12 >seq16755 Length=287 Score = 84.2 bits (92), Expect = 4e-12 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 20980 AAATTTGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGT 21030 |||| ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 88 AAATATGGTGGCCCCTGCTGGACTTGAACCAGCGACTAAGCGATTATGAGT 138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97816426431776