Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq36416 114 9e-21
>seq36416
Length=241146
Score = 114 bits (126), Expect = 9e-21
Identities = 167/234 (71%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092
|||| ||||| || |||||||||| ||| ||||| ||||| | ||||| | ||| || |
Sbjct 77813 CTTTGTATTCCGCGCCGAAATGCCGCCATTGAAACCCATAAATTGGTCCCAAATCGCCCT 77872
Query 102093 CATCTCTGTCATAAAAACC--AAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCA 102150
| ||||| || ||| || ||| | |||| || || | || | || ||||||||
Sbjct 77873 CCTCTCTATCCGTAAACCCGCAAGCGT--CTAAGAACGAACGCGAGGCGTTTGCATCCCA 77930
Query 102151 AATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAA 102210
|| | ||||| | || | ||||||| | || ||||||||||| ||||| ||
Sbjct 77931 TATACGAACGCCTTTGTCGGACAACTCTTTGGCATTCGTCGATCCTCTGATGAACCATAA 77990
Query 102211 CAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA 102264
|| ||| || || || ||| ||||||| || ||||| || || || | ||||||
Sbjct 77991 CAATTCCTCTACCACGCCTTTCCAAAACACCCTCTTCGTGGTCAATAATGGAAA 78044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361028561788568
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |