Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq36416 96.9 3e-15
seq16708 86.0 5e-12
>seq36416
Length=241146
Score = 96.9 bits (106), Expect = 3e-15
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 25149 GATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGAT 25208
|||||||||||||| || ||||| |||||||||||||| ||| | |||| || |||||
Sbjct 80542 GATCAACAAAGACTGATTTTTGCCGGCAAACAATTGGAGGATGGGAGAACTCTGTCCGAT 80601
Query 25209 TACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| || || |||||||| || || | || |||||||||| || |||| ||
Sbjct 80602 TATAACATCCAAAAGGAGTCCACGTTACATTTGGTGTTACGCTTGAGAGGCGG 80654
>seq16708
Length=1145218
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093
|||||| || || |||| |||||||| ||||| || || ||| ||| || | |
Sbjct 1010560 AATGCAGATTTTTGTCAAGACATTGACAGGCAAGACGATAACCCTCGAGGTTGAGGCTTC 1010501
Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153
|| ||| | | || ||||| || ||| || ||||| || | || || ||
Sbjct 1010500 CGATACGATCGAGAATGTCAAGGCCAAGATTCAGGACAAAGAGGGAATACCTCCGGACCA 1010441
Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATT--CCAAAACTATGGCCGATTAC 25211
|||| |||| ||||| || || |||||| | |||||| | | ||| | | ||||||
Sbjct 1010440 ACAACGACTGATCTTCGCTGGAAAACAACTCGAAGATGGGCGCACACTCT--CTGATTAC 1010383
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||||| || |||||||| |||||||| |||| ||||| | |||| ||
Sbjct 1010382 AATATACAGAAGGAATCCACTCTTCATCTGGTTCTACGACTGAGAGGCGG 1010333
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410543626959152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |