Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq16708 143 2e-29
>seq16708
Length=1145218
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | ||||| ||||| || | |||||||| || ||||||||||| || |
Sbjct 654043 CCTCCACGAAGTCTCAGGACCAAATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCCGAC 654102
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||| || |||||| ||||| || |||||| | || | |||||||||||| |||||
Sbjct 654103 AAAGTACGTCCATCCTCCAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGATCAGGAGGA 654162
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| ||||||||||| ||||| ||| || | |||| ||||| | | |||||
Sbjct 654163 ATTCCCTCCTTGTCCTGGATTTTGGCTTTCACATTCTCGATCGTGTCAGAGGCTTCGACT 654222
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | ||| | ||||| || || ||||| ||||| |||||||||||
Sbjct 654223 TCCAGGGTGATGGTTTTCCCTGTGAGAGTCTTTACGAAAATCTGCAT 654269
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | ||||| ||||| || | |||||||| || ||||||||||||||
Sbjct 654271 CCTCCACGAAGTCTCAGGACCAAATGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGAT 654330
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||| || |||||| || || || |||||| |||| | |||||||||||| |||||
Sbjct 654331 AGAGTTCGTCCATCCTCTAGTTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAGGA 654390
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGAC 118690
|| |||||||| || ||||| ||| || | ||||| || || | ||| |||||
Sbjct 654391 ATTCCCTCCTTATCCTGGATTTTGGCTTTCACGTTTTCGATCGTATCTGAAGCT-TCGAC 654449
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | ||| | ||||| || || ||||| ||||| |||||||||||
Sbjct 654450 TTCCAGGGTGATAGTTTTCCCTGTGAGAGTCTTTACGAAAATCTGCAT 654497
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | ||||| ||||| || | ||||| ||||| ||||||||||||||
Sbjct 654727 CCTCCACGAAGTCTCAGGACCAAATGAAGAGTAGATTCTTTCTGAATGTTGTAATCAGAT 654786
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||| || |||||| || || || |||||| |||| | |||||||||||| |||||
Sbjct 654787 AGAGTTCGTCCATCCTCTAGTTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAGGA 654846
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGAC 118690
|| |||||||| || ||||| ||| || | ||||| || || | ||| |||||
Sbjct 654847 ATTCCCTCCTTATCCTGGATTTTGGCTTTCACGTTTTCGATCGTATCTGAAGCT-TCGAC 654905
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | ||| | ||||| || || ||||| ||||| |||||||||||
Sbjct 654906 TTCCAGGGTGATAGTTTTCCCTGTGAGAGTCTTTACGAAAATCTGCAT 654953
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
|||||| || | ||||| |||| || | || ||||| ||||| |||||||||||
Sbjct 653814 ACCTCCTCGAAGTCTCAGGACCAGATGAAGCGTGGACTCCTTTTGGATGTTGTAATCAGA 653873
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
| ||| || |||||| | ||| || |||||| |||| | |||||||||||| |||||
Sbjct 653874 TAGAGTTCGTCCATCCTCTAACTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAGG 653933
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| ||||||||||| ||||| ||| || | |||| ||||| | | |||||
Sbjct 653934 AATTCCCTCCTTGTCCTGGATTTTGGCTTTCACATTCTCGATCGTGTCAGAGGCTTCGAC 653993
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | ||| | ||||| || || ||||| ||||| |||||||||||
Sbjct 653994 TTCCAAGGTGATGGTTTTCCCTGTGAGAGTCTTTACGAAAATCTGCAT 654041
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | ||||| |||| || | || ||||| ||||| |||||||||||
Sbjct 654499 CCTCCACGAAGTCTCAGGACCAGATGAAGCGTGGACTCCTTTTGGATGTTGTAATCAGAT 654558
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||| || |||||| | ||| || |||||| |||| | |||||||||||| |||||
Sbjct 654559 AGAGTTCGTCCATCCTCTAACTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAGGA 654618
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| ||||||||||| ||||| ||| || | |||| ||||| | | |||||
Sbjct 654619 ATTCCCTCCTTGTCCTGGATTTTGGCTTTCACATTCTCGATCGTGTCAGAGGCTTCGACT 654678
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | ||| | ||||| || || ||||| ||||| |||||||||||
Sbjct 654679 TCCAGGGTGATGGTTTTCCCTGTGAGAGTCTTTACGAAAATCTGCAT 654725
Score = 129 bits (142), Expect = 5e-25
Identities = 168/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | ||||| |||| || | || ||||| ||||| |||||||||||
Sbjct 654955 CCTCCACGAAGTCTCAGGACCAGATGAAGCGTGGACTCCTTTTGGATGTTGTAATCAGAG 655014
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||| || |||||| || || || |||||| |||| | |||||||||||| |||||
Sbjct 655015 AGAGTACGTCCATCCTCTAGTTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAGGA 655074
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGAC 118690
|| || ||||| || ||||| ||| || | ||||| ||||| | ||| |||||
Sbjct 655075 ATTCCTTCCTTATCCTGGATTTTGGCTTTCACGTTTTCGATCGTGTCTGAAGCT-TCGAC 655133
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740
|| | ||| | ||||| || || ||||| || ||||| ||||||||||
Sbjct 655134 TTCCAGGGTGATGGTTTTCCCTGTGAGAGTCTTGACAAAGATCTGCATGG 655183
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| |||||||| || ||||| |||||| | || | ||| ||||| |||||||||
Sbjct 1010135 GTCGACTCTTTCTGGATGTTATAATCGGAAAGCGTTCTTCCATCTTCGAGTTGTTTTCCA 1010194
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| | || || || || ||||| || || || ||||| |||||| ||
Sbjct 1010195 GCGAAGATCAATCGTTGTTGGTCCGGAGGAATTCCTTCTTTGTCCTGAATTTTGGCCTTG 1010254
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||||| | ||| ||||||| ||| | ||||||||| |||| ||
Sbjct 1010255 ACATTCTCGATCGTGTCGGAAGCCTCAACCTCGAGGGTTATCGTTTTGCCTGTCAACGTC 1010314
Query 118722 TTTACAAAAATCTGCAT 118738
|||||||||||||||||
Sbjct 1010315 TTTACAAAAATCTGCAT 1010331
Score = 111 bits (122), Expect = 1e-19
Identities = 145/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCTCGAGCTGTTTTC 118599
|| || |||||||| || |||||||| | |||| |||| ||| ||||| |||||||
Sbjct 1010819 GTGGATTCTTTTTGTATATTGTAATCAG--AGAGTGTGCGTCCATCTTCGAGTTGTTTTC 1010876
Query 118600 CAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTT 118659
||||| |||| || || || || || ||||| || || || |||||| ||| || |
Sbjct 1010877 CAGCGAAGATCAGTCGTTGTTGGTCCGGAGGAATTCCTTCTTTGTCTTGAATCTTGGCCT 1010936
Query 118660 TAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAG 118719
| || | ||| | || || | ||| ||||||| ||| | ||| ||||| |||| |
Sbjct 1010937 TGACGTTTTCAATCGTATCGGAAGCCTCAACCTCGAGGGTTATCGTCTTGCCTGTCAACG 1010996
Query 118720 TTTTTACAAAAATCTGCAT 118738
| || ||||||||||||||
Sbjct 1010997 TCTTGACAAAAATCTGCAT 1011015
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| || || || || || |||||||| | |||||| ||| ||||| |||||||||
Sbjct 1010363 GTGGATTCCTTCTGTATATTGTAATCAGAGAGTGTGCGCCCATCTTCGAGTTGTTTTCCA 1010422
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| || || || || || |||||||| ||||| ||||| ||| || ||
Sbjct 1010423 GCGAAGATCAGTCGTTGTTGGTCCGGAGGTATTCCCTCTTTGTCCTGAATCTTGGCCTTG 1010482
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| || || | ||| ||||||| ||| | ||| ||||| |||| ||
Sbjct 1010483 ACATTCTCGATCGTATCGGAAGCCTCAACCTCGAGGGTTATCGTCTTGCCTGTCAATGTC 1010542
Query 118722 TTTACAAAAATCTGCAT 118738
|| ||||||||||||||
Sbjct 1010543 TTGACAAAAATCTGCAT 1010559
Score = 96.9 bits (106), Expect = 3e-15
Identities = 142/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCTCGAGCTGTTTTC 118599
|| ||||| || || ||||| ||||| | |||| |||| ||| || | ||| ||||
Sbjct 1009907 GTCGACTCCTTCTGGATGTTATAATCAG--AAAGTGTGCGTCCATCTTCTAACTGCTTTC 1009964
Query 118600 CAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTT 118659
||||| |||| | | ||||| || || || || || || |||||| |||||| ||
Sbjct 1009965 CAGCGAAGATCAATCTTTGCTGGTCCGGTGGAATTCCTTCTTTGTCTTGAATTTTAGCTT 1010024
Query 118660 TAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAG 118719
| || | ||||| ||| || | |||||| || | || | || || || |||||||
Sbjct 1010025 TCACATTTTCGATGGTATCGGACGCCTCGACTTCCAATGTGATAGTCTTCCCAGTCAGAG 1010084
Query 118720 TTTTTACAAAAATCTGCAT 118738
| || ||||||||||||||
Sbjct 1010085 TCTTAACAAAAATCTGCAT 1010103
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCTCGAGCTGTTTTC 118599
|| || || || || || |||||||| | |||| |||| ||| ||||| |||||||
Sbjct 1011047 GTGGATTCCTTCTGTATATTGTAATCAG--AGAGTGTGCGTCCATCTTCGAGTTGTTTTC 1011104
Query 118600 CAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTT 118659
||||| |||| | || || || || ||||| || || || ||||| |||||| |
Sbjct 1011105 CAGCGAAGATCAATCGTTGTTGGTCCGGAGGAATTCCTTCTTTGTCCTGAATTTTGGCCT 1011164
Query 118660 TAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAG 118719
| || | || | || || | ||| ||||||| ||| | ||| || || |||| ||
Sbjct 1011165 TGACGTTCTCAATCGTATCGGAAGCCTCAACCTCGAGGGTTATCGTCTTTCCAGTCAAAG 1011224
Query 118720 TTTTTACAAAAATCTGCAT 118738
| || ||||||||||||||
Sbjct 1011225 TCTTGACAAAAATCTGCAT 1011243
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/199 (70%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCTCGAGCTGTTTTC 118599
|| || || || || || |||||||| | |||| |||| |||||| ||||| ||||
Sbjct 1010591 GTGGATTCCTTCTGTATATTGTAATCAG--AGAGTGTGCGTCCATCCTCCAGCTGCTTTC 1010648
Query 118600 CAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTT 118659
| || |||| | || || ||||| |||||||| ||||| ||||| |||||| |
Sbjct 1010649 CGGCAAAGATTAATCGTTGTTGATCCGGAGGTATTCCCTCTTTGTCCTGAATTTTGGCCT 1010708
Query 118660 TAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAG 118719
| || | || | || || | |||||| || | || | || || || |||| |
Sbjct 1010709 TGACATTCTCAATCGTATCAGAAGCCTCGACTTCCAATGTGATAGTCTTCCCAGTCAACG 1010768
Query 118720 TTTTTACAAAAATCTGCAT 118738
|||| ||||||||||||||
Sbjct 1010769 TTTTCACAAAAATCTGCAT 1010787
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433563031409056
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