Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq35862 105 1e-17
>seq35862
Length=1028256
Score = 105 bits (116), Expect = 1e-17
Identities = 160/225 (71%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 135610 GAGTGGACTACGTGGaaaaaaaTACCCGATCCTGTTTTGCATATAGAACTTAGG-AGATG 135668
|| ||| || | ||| || | | | ||||||||| ||||| || || |||| | |||
Sbjct 908801 GAATGGGCTGCCTGGCAAGACAGAGGCGATCCTGTGTTGCACATCGAT-TTAGTCAAATG 908859
Query 135669 GGCGGATGTTTTTATTATAGCGCCCTTAACGGCAAATACGTTAGCAAAAATAGCTAATGG 135728
||| ||| | || | ||||| || || || ||||| | | ||||| || | |||
Sbjct 908860 GGCAGATCTGTTCTTGATAGCCCCACTAGACGCCAATACACTTGGTAAAATGGCCAGTGG 908919
Query 135729 TATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGATACAAACAAACCACTCAT 135788
|||| |||||||| || | || | | ||| | | ||||||||| | || ||||| |
Sbjct 908920 TATAAGCGATAATATATTAACTTGTGTTGCACGTGCCTGGGATCCTTTGAAGCCACTGGT 908979
Query 135789 TTTCTGTCCTGCAATGAATACTCTTATGTGGGAACATCCTATTAC 135833
|| |||||||| ||||||||| |||||||||||||| ||||
Sbjct 908980 ATTTTGTCCTGCTATGAATACTAAAATGTGGGAACATCCAGTTAC 909024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 922613247302720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |