Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq35862 105 1e-17 >seq35862 Length=1028256 Score = 105 bits (116), Expect = 1e-17 Identities = 160/225 (71%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 135610 GAGTGGACTACGTGGaaaaaaaTACCCGATCCTGTTTTGCATATAGAACTTAGG-AGATG 135668 || ||| || | ||| || | | | ||||||||| ||||| || || |||| | ||| Sbjct 908801 GAATGGGCTGCCTGGCAAGACAGAGGCGATCCTGTGTTGCACATCGAT-TTAGTCAAATG 908859 Query 135669 GGCGGATGTTTTTATTATAGCGCCCTTAACGGCAAATACGTTAGCAAAAATAGCTAATGG 135728 ||| ||| | || | ||||| || || || ||||| | | ||||| || | ||| Sbjct 908860 GGCAGATCTGTTCTTGATAGCCCCACTAGACGCCAATACACTTGGTAAAATGGCCAGTGG 908919 Query 135729 TATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGATACAAACAAACCACTCAT 135788 |||| |||||||| || | || | | ||| | | ||||||||| | || ||||| | Sbjct 908920 TATAAGCGATAATATATTAACTTGTGTTGCACGTGCCTGGGATCCTTTGAAGCCACTGGT 908979 Query 135789 TTTCTGTCCTGCAATGAATACTCTTATGTGGGAACATCCTATTAC 135833 || |||||||| ||||||||| |||||||||||||| |||| Sbjct 908980 ATTTTGTCCTGCTATGAATACTAAAATGTGGGAACATCCAGTTAC 909024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922613247302720