Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_002484.2 Length=56426 Score E Sequences producing significant alignments: (Bits) Value seq10258 84.2 8e-12 >seq10258 Length=339 Score = 84.2 bits (92), Expect = 8e-12 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 48985 CGCCCGGATAAGCGCCCGGTGCTCAGCGACCTACGCGAGTCCGGCGCCATCGAGCAAGAC 49044 ||| | |||||||| || || | |||||| ||||||||||| | |||||||| ||| Sbjct 22 CGCGCCGATAAGCGTCCCGTAAACTCCGACCTGCGCGAGTCCGGTTCTATCGAGCAGGAC 81 Query 49045 GCGGACATCGTGATGTTCGTGTACCGCGATGAAGTCTATTTCCCGAACAGCGATAAGAAG 49104 || || | | ||||| | ||||| ||||| |||||| | ||| ||||||| ||| Sbjct 82 GCCGATCTGATCATGTTTATCTACCGTGATGAGGTCTATCACGAGAATAGCGATATGAAA 141 Query 49105 GGCATCGGCGAAAT 49118 || |||| ||||| Sbjct 142 GGTATCGCTGAAAT 155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180333245721408