Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq36416 95.1 1e-14 >seq36416 Length=241146 Score = 95.1 bits (104), Expect = 1e-14 Identities = 156/220 (71%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 20347 CCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCT 20406 || |||||| ||||||| || | | || ||||| | | || | || |||| | Sbjct 77479 CCTAACGACCGAAGAATCATAATGTCGGCGTGGAATCCGATCGACTTACCAAAAATGACC 77420 Query 20407 TTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTG-CTAATAATGAATTGTCGTGTC 20464 ||||||| || || || | || || |||||||| | || | |||||||| |||| Sbjct 77419 CTGCCTCCTTGCCAC-TGTTTCGCACAGTTTTACGTGAACGAAGGA-GAATTGTCCTGTC 77362 Query 20465 AAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATG 20524 |||||||||| || ||| |||||||| ||||| || || |||||||| ||| ||| | Sbjct 77361 AAATGTATCAGAGAAGCGCGGATATGGGTCTGGGCGTACCGTTCAATATAGCATCTTACG 77302 Query 20525 CGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAA 20564 | ||| | ||| ||| | ||||| ||||| ||||||| Sbjct 77301 CTCTGTTAACGCGCATGCTGGCACAAGTTACGAATTTAAA 77262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398937983898760