Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq16708 104 2e-17
>seq16708
Length=1145218
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
|||||||| ||||| || || || || ||||||||||||||| |||| || || | |
Sbjct 1010331 ATGCAGATTTTTGTAAAGACGTTGACAGGCAAAACGATAACCCTCGAGGTTGAGGCTTCC 1010272
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|||| | || | ||| |||| |||||| | |||||||| | || |||||
Sbjct 1010271 GACACGATCGAGAATGTCAAGGCCAAAATTCAGGACAAAGAAGGAATTCCTCCGGACCAA 1010212
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011
||||| || || | || || |||||||| |||||| | || | |||||| | |
Sbjct 1010211 CAACGATTGATCTTCGCTGGAAAACAACTCGAAGATGGAAGAACGCTTTCCGATTATAAC 1010152
Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058
|| ||||||||| | || |||||| | || ||||| || | || ||
Sbjct 1010151 ATCCAGAAAGAGTCGACCCTTCATCTGGTTCTACGACTGAGAGGCGG 1010105
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 24829 ATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCG 24888
||||||||||| || || || || ||||| ||||| ||||||||| |||| || || |
Sbjct 1011474 ATCATGCAGATCTTCGTCAAGACGTTAACAGGCAAGACGATAACCCTCGAGGTTGAGGCT 1011415
Query 24889 AGCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGAC 24948
||| | | || | || |||| |||||| | |||||||| | || |||
Sbjct 1011414 TCCGATACGATTGAGAACGTCAAGGCCAAAATTCAGGACAAAGAAGGAATTCCTCCGGAC 1011355
Query 24949 CAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTAC 25008
|| ||||| || || | || || |||||||| |||||| || | ||||||
Sbjct 1011354 CAACAACGATTGATCTTCGCTGGAAAACAACTCGAAGATGGACGCACACTCTCTGATTAC 1011295
Query 25009 AGCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058
| |||||||| || |||| |||||| | || ||||| || | || ||
Sbjct 1011294 AATATACAGAAGGAATCCACTCTTCATCTGGTTCTACGACTGAGAGGCGG 1011245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418046200290560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |