Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq36416 96.9 7e-15 >seq36416 Length=241146 Score = 96.9 bits (106), Expect = 7e-15 Identities = 130/175 (74%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 35535 GAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTA--TGGCTCTTCCTCC 35592 |||| || || ||| |||| |||||||| || || ||| ||| | || | || ||||| Sbjct 77469 GAAGAATCATAATGTCGGCGTGGAATCCGATCGA-CTT-ACCAAAAATGACCCTGCCTCC 77412 Query 35593 ATGCCACATGACT-GCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCAGTTGTATC 35651 |||||| || | || || ||||| ||| | ||||||||||| || || |||||| Sbjct 77411 TTGCCAC-TGTTTCGCACAGTTTTACGTGAACGAAGGAGAATTGTCCTGTCAAATGTATC 77353 Query 35652 AGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACTCTCT 35706 || |||||| ||| | || ||||||| || |||||||| ||||| ||| |||| Sbjct 77352 AGAGAAGCGCGGATATGGGTCTGGGCGTACCGTTCAATATAGCATCTTACGCTCT 77298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988942846052440