Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq36416 98.7 1e-15 >seq36416 Length=241146 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 70208 AGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGT 70267 || ||| |||||| | |||||||| || || | ||||| | || || || || Sbjct 77467 AGAATCATAATGTCGGCGTGGAATCCGATCGACTTACCAAAAATGACCCTGCCTCCTTGC 77408 Query 70268 CACTGTTTGGCTCAGTTTTACTCGTACGATGGCAAATTGTCATGCTTAATGTATCAGAGG 70327 |||||||| || ||||||||| | |||| || ||||||| || |||||||||||| Sbjct 77407 CACTGTTTCGCACAGTTTTACGTGAACGAAGGAGAATTGTCCTGTCAAATGTATCAGAGA 77348 Query 70328 AGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGACGCAC 70387 || || || ||||| || || ||||| || || || ||| || || |||| |||| | Sbjct 77347 AGCGCGGATATGGGTCTGGGCGTACCGTTCAATATAGCATCTTACGCTCTGTTAACGCGC 77288 Query 70388 ATGATTGCTCACATTAC 70404 ||| | || || |||| Sbjct 77287 ATGCTGGCACAAGTTAC 77271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740590776479680