Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_005135.1
Length=173591
Score E
Sequences producing significant alignments: (Bits) Value
seq25081 100 3e-16
>seq25081
Length=1200
Score = 100 bits (110), Expect = 3e-16
Identities = 159/226 (70%), Gaps = 4/226 (2%)
Strand=Plus/Minus
Query 6977 AGAACCGAATCACCCGGCTTCAGGAGTGCTTGGTA--AACTGCCTGGTTTGCTTGTGAAC 7034
|| || | ||| || |||| ||| | || ||||| ||| || ||| || || || |
Sbjct 933 AGTACGGTATCGCCAGGCTGCAGCAATG--TGGTATAAACGGCGAAGTTGGCCTGGGAGC 876
Query 7035 CGGAATGAGGTTGAACGTTTGCGAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTG 7094
| || ||||| || ||||| || ||| | | ||||| |||| ||||| |||||||
Sbjct 875 CCGAGTGAGGCTGCACGTTGGCATAATCGGCGCCAAACAAGGCTTTGGCACGATCAATTG 816
Query 7095 CCAGGTTCTCGATTTCATCGGCTTTTACGCAGCCGCCATAATACCGTTTGCCCGGATATC 7154
|||| | ||| | |||| | | | |||| ||||| || || || || || ||||| |
Sbjct 815 CCAGTTGCTCTACCACATCAACATATTCGCATCCGCCGTAGTAGCGCTTCCCGGGATAGC 756
Query 7155 CCTCAGCATACTTGTTGGTAAAAATAGAACCCTGTGCTTTCATAAC 7200
| ||||| ||||| ||||| | ||||||||||| | ||||||
Sbjct 755 CTTCAGCGTACTTATTGGTCAGTTGTGAACCCTGTGCCTGCATAAC 710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 555012154921280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |