Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq25081 100 3e-16 >seq25081 Length=1200 Score = 100 bits (110), Expect = 3e-16 Identities = 159/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 6977 AGAACCGAATCACCCGGCTTCAGGAGTGCTTGGTA--AACTGCCTGGTTTGCTTGTGAAC 7034 || || | ||| || |||| ||| | || ||||| ||| || ||| || || || | Sbjct 933 AGTACGGTATCGCCAGGCTGCAGCAATG--TGGTATAAACGGCGAAGTTGGCCTGGGAGC 876 Query 7035 CGGAATGAGGTTGAACGTTTGCGAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTG 7094 | || ||||| || ||||| || ||| | | ||||| |||| ||||| ||||||| Sbjct 875 CCGAGTGAGGCTGCACGTTGGCATAATCGGCGCCAAACAAGGCTTTGGCACGATCAATTG 816 Query 7095 CCAGGTTCTCGATTTCATCGGCTTTTACGCAGCCGCCATAATACCGTTTGCCCGGATATC 7154 |||| | ||| | |||| | | | |||| ||||| || || || || || ||||| | Sbjct 815 CCAGTTGCTCTACCACATCAACATATTCGCATCCGCCGTAGTAGCGCTTCCCGGGATAGC 756 Query 7155 CCTCAGCATACTTGTTGGTAAAAATAGAACCCTGTGCTTTCATAAC 7200 | ||||| ||||| ||||| | ||||||||||| | |||||| Sbjct 755 CTTCAGCGTACTTATTGGTCAGTTGTGAACCCTGTGCCTGCATAAC 710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555012154921280