Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_005260.1
Length=233234
Score E
Sequences producing significant alignments: (Bits) Value
seq12851 113 7e-20
>seq12851
Length=316
Score = 113 bits (124), Expect = 7e-20
Identities = 205/300 (68%), Gaps = 0/300 (0%)
Strand=Plus/Minus
Query 43640 CCGTAGTCAAGCTGGCGAATTCGATTTTCTTCCACGCCCTTGTTGTTTTTCAGAACAAGG 43699
||||| || | || || | || || |||||||||| |||||||| || || ||
Sbjct 308 CCGTAATCCATATGCCGCACCCGGTTGGCTTCCACGCCGCGATTGTTTTTTAGCACCAGC 249
Query 43700 ATTTTTTCAACTTCAAGATGCCACATTGGATAGTAAAGAGTAGCAGCGCCACCGCGTACA 43759
| |||| | || | ||||||||| |||||| | | || || ||||| ||||| ||
Sbjct 248 AGACTTTCGATCTCCAAATGCCACATAGGATAGAACAACGTGGCCGCGCCGCCGCGCACG 189
Query 43760 CCACCCTGTGAGCAACTTTTTACCGCAGTCTGGAAATATTTCCAGAACGGAATAATACCA 43819
|| ||||| || || ||| ||||| |||||||||| ||| ||||||||||| |||
Sbjct 188 CCGCCCTGAGAACAGGATTTGACCGCGGTCTGGAAATGTTTATAGAACGGAATACAACCG 129
Query 43820 GTGTGGCGAACTTCACCACTTCGAATGCGAGAACCTTCGGCACGAATAGCGCCACCGTTG 43879
|| ||| | |||| || | ||||| | || || || ||| ||| | |||
Sbjct 128 GTATGGAAAGCTTCGCCGCCGCGAATCGGGCTCCCCAACGCGCGGATACGGCCGGCATTG 69
Query 43880 ATACCGATACCAGCGCGTTTGCTAATATAGTCAACGATTGAACTTGCGGTAGCGTTAATG 43939
|| || || || ||||| | | | ||| | || || | || | |||||||||||||
Sbjct 68 ATGCCTATCCCGGCGCGCTGGGATACATATTTTACAATCGCGCTGGAGGTAGCGTTAATG 9
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 745749113832320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |