Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq10258 138 7e-28 seq16755 96.9 2e-15 >seq10258 Length=339 Score = 138 bits (152), Expect = 7e-28 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 72405 CTTGAACAGCGTGCGGACAAACGACCGGTAAATTCAGATTTACGTGAATCAGGAGCAATT 72464 |||||||| || || || || || || ||||| || || | || || || || | || Sbjct 13 CTTGAACAACGCGCCGATAAGCGTCCCGTAAACTCCGACCTGCGCGAGTCCGGTTCTATC 72 Query 72465 GAGCAGGACGCAGACCTGATTATGTTTCTGTATCGCGACGAAGTTTATCACCCGGATAGC 72524 ||||||||||| || ||||| |||||| | || || || || || |||||| | ||||| Sbjct 73 GAGCAGGACGCCGATCTGATCATGTTTATCTACCGTGATGAGGTCTATCACGAGAATAGC 132 Query 72525 GAAATGAAGGGCATTGCCGAGGTAATTATCGGAAAGCAACGAAATGGCCCAATTGGCACG 72584 || ||||| || || || || | ||| |||| ||||| |||| ||||| |||||||| Sbjct 133 GATATGAAAGGTATCGCTGAAATTATTCTCGGCAAGCAGAGAAACGGCCCCATTGGCACT 192 Query 72585 GTGAGATTGGCTTTTAACGGCCAATACTCACGGTTTGATAACTATGCCGGT 72635 ||| | || | || ||||| || | ||||| || || || ||||| ||| Sbjct 193 GTGCGGCTGACCTTCAACGGACAGTGGTCACGATTCGACAATTATGCTGGT 243 >seq16755 Length=287 Score = 96.9 bits (106), Expect = 2e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 70933 GGCCCTTTAGCTCAGTGGTTAGAGCTGGCGACTCATAATCGCACGGTCACCGGTTCAAGT 70992 || || ||||||||||||||||||| ||||||||||||||| ||| | ||||||||| Sbjct 168 GGTCCCTTAGCTCAGTGGTTAGAGCAAGCGACTCATAATCGCTTAGTCGCTGGTTCAAGT 109 Query 70993 CCGGTAGGGGCCACCATATTT 71013 || | |||||||||||||||| Sbjct 108 CCAGCAGGGGCCACCATATTT 88 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 303048316904328