Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_006552.1 Length=65195 Score E Sequences producing significant alignments: (Bits) Value seq14305 98.7 4e-16 >seq14305 Length=304 Score = 98.7 bits (108), Expect = 4e-16 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 11164 GCCGCCGAGCAGTTGCATGTTGCCGTTGATGTCGACCACTACCTCGGTGCTGTAGTGGTC 11223 ||| ||||||| ||||||| ||||| | | |||||| || |||||| | ||| | || Sbjct 156 GCCCCCGAGCATTTGCATGGTGCCGCCCACATTGACCACAACTTCGGTGGTATAGCGATC 215 Query 11224 CTGGCCGTCCTGGCCCTGCCACTTGCGGGTGCGTAGGCTGCCTTCGATGTAGACCTGGGA 11283 ||| ||| |||| |||||||||||||||| | || || ||||| || || ||||| Sbjct 216 CTGACCGCTCTGGTCCTGCCACTTGCGGGTCTGCAGCGATCCCTCGATATACACTTGGGA 275 Query 11284 GCCCTTTCGCAGGTATT 11300 ||| || ||||| |||| Sbjct 276 GCCTTTACGCAGATATT 292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 208370702464288