Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq16708 131 2e-25 >seq16708 Length=1145218 Score = 131 bits (144), Expect = 2e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | |||||||| || || || || ||| |||| ||| |||| | || | Sbjct 1010332 AATGCAGATTTTTGTAAAGACGTTGACAGGCAAAACGATAACCCTCGAGGTTGAGGCTTC 1010273 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||| |||||| | ||||| || ||| ||||||||||| || ||||| || || Sbjct 1010272 CGACACGATCGAGAATGTCAAGGCCAAAATTCAGGACAAAGAAGGAATTCCTCCGGACCA 1010213 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 |||| || | || | || || |||||||||||||||| |||| | ||| ||||| Sbjct 1010212 ACAACGATTGATCTTCGCTGGAAAACAACTCGAAGATGGAAGAACGCTTTCCGATTATAA 1010153 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||| || ||||| || || | |||||||| || |||| ||||| |||| Sbjct 1010152 CATCCAGAAAGAGTCGACCCTTCATCTGGTTCTACGACTGAGAGGCGGAA 1010103 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | ||||| || ||||| || || || |||| ||| |||| | || | Sbjct 1010560 AATGCAGATTTTTGTCAAGACATTGACAGGCAAGACGATAACCCTCGAGGTTGAGGCTTC 1010501 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||| || |||||| | ||||| |||||| |||||||| || |||||||| || || Sbjct 1010500 CGATACGATCGAGAATGTCAAGGCCAAGATTCAGGACAAAGAGGGAATACCTCCGGACCA 1010441 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 |||| |||| || | || || |||||||||||||||| | | || || || || Sbjct 1010440 ACAACGACTGATCTTCGCTGGAAAACAACTCGAAGATGGGCGCACACTCTCTGATTACAA 1010381 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || || || ||||| ||| | |||||||| || |||| ||||| |||| Sbjct 1010380 TATACAGAAGGAATCCACTCTTCATCTGGTTCTACGACTGAGAGGCGGAA 1010331 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | ||||| || || || || || || |||| ||| |||| | || | Sbjct 1011016 AATGCAGATTTTTGTCAAGACGTTGACAGGCAAGACGATAACCCTCGAGGTTGAGGCTTC 1010957 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||| || || || | ||||| |||||| ||||||||||| || ||||| || || Sbjct 1010956 CGATACGATTGAAAACGTCAAGGCCAAGATTCAAGACAAAGAAGGAATTCCTCCGGACCA 1010897 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 |||| |||| || | || || |||||||||||||||| | | || || || || Sbjct 1010896 ACAACGACTGATCTTCGCTGGAAAACAACTCGAAGATGGACGCACACTCTCTGATTACAA 1010837 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || ||||||||||| ||| | ||||| || || | ||| |||| |||| Sbjct 1010836 TATACAAAAAGAATCCACTCTGCATCTTGTACTCCGCCTTCGAGGTGGAA 1010787 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | ||||| || || || |||||||| |||| ||| |||| | || | Sbjct 1011244 AATGCAGATTTTTGTCAAGACTTTGACTGGAAAGACGATAACCCTCGAGGTTGAGGCTTC 1011185 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||| || || ||| | ||||| || ||| ||||||||||| || ||||| || || Sbjct 1011184 CGATACGATTGAGAACGTCAAGGCCAAAATTCAGGACAAAGAAGGAATTCCTCCGGACCA 1011125 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 |||| || | || | || || |||||||||||||||| | | || || || || Sbjct 1011124 ACAACGATTGATCTTCGCTGGAAAACAACTCGAAGATGGACGCACACTCTCTGATTACAA 1011065 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || || || ||||| ||| | |||||||| || || | ||||| |||| Sbjct 1011064 TATACAGAAGGAATCCACTCTTCATCTGGTTCTACGATTGAGAGGCGGAA 1011015 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || ||||| || || |||| ||| |||| | || | | Sbjct 1011471 ATGCAGATCTTCGTCAAGACGTTAACAGGCAAGACGATAACCCTCGAGGTTGAGGCTTCC 1011412 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || ||| | ||||| || ||| ||||||||||| || ||||| || ||| Sbjct 1011411 GATACGATTGAGAACGTCAAGGCCAAAATTCAGGACAAAGAAGGAATTCCTCCGGACCAA 1011352 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| || | || | || || |||||||||||||||| | | || || || || Sbjct 1011351 CAACGATTGATCTTCGCTGGAAAACAACTCGAAGATGGACGCACACTCTCTGATTACAAT 1011292 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || || || ||||| ||| | |||||||| || |||| ||||| |||| Sbjct 1011291 ATACAGAAGGAATCCACTCTTCATCTGGTTCTACGACTGAGAGGCGGAA 1011243 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | || ||||| || | || || ||| | |||||| | ||| | ||| | Sbjct 654270 AATGCAGATTTTCGTAAAGACTCTCACAGGGAAAACCATCACCCTGGAAGTCGAAGCCTC 654211 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| |||||| | || ||| || || ||||| || || || ||||| ||||| Sbjct 654210 TGACACGATCGAGAATGTGAAAGCCAAAATCCAGGACAAGGAGGGAATTCCTCCTGATCA 654151 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || | | |||| || ||||| || || || |||| | | | ||||| || Sbjct 654150 GCAGCGTTTGATTTTCGCTGGCAAGCAGCTGGAGGATGGACGTACTTTGTCGGACTACAA 654091 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 |||||| || || |||||| | ||| |||||||||||||| | ||||||| Sbjct 654090 CATTCAGAAGGAGTCTACTCTTCATTTGGTCCTGAGACTTCGTGGAGGAA 654041 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | || ||||| || | || || ||| | |||||| | ||| | ||| | Sbjct 654954 AATGCAGATTTTCGTAAAGACTCTCACAGGGAAAACTATCACCCTGGAAGTCGAAGCTTC 654895 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || || ||||| | || ||| || || || || || || || ||||| ||||| Sbjct 654894 AGATACGATCGAAAACGTGAAAGCCAAAATCCAGGATAAGGAGGGAATTCCTCCTGATCA 654835 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || | | || | || ||||| ||||| || |||| ||| | || || || Sbjct 654834 GCAGCGTTTGATCTTCGCTGGCAAGCAACTAGAGGATGGACGAACTCTATCTGATTACAA 654775 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 |||||| |||||||||||| | ||| |||||||||||||| | ||||||| Sbjct 654774 CATTCAGAAAGAATCTACTCTTCATTTGGTCCTGAGACTTCGTGGAGGAA 654725 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || | || || ||| | |||||| | ||| | ||| | Sbjct 655181 ATGCAGATCTTTGTCAAGACTCTCACAGGGAAAACCATCACCCTGGAAGTCGAAGCTTCA 655122 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || ||| || || || || ||||| || ||||| ||||| Sbjct 655121 GACACGATCGAAAACGTGAAAGCCAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 655062 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | | || | || ||||| ||||| || |||| | | || || || ||| Sbjct 655061 CAGCGTTTGATCTTCGCTGGCAAGCAACTAGAGGATGGACGTACTCTCTCTGATTACAAC 655002 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || ||||| || || || | |||||||||||||||||| | ||||||| Sbjct 655001 ATCCAAAAGGAGTCCACGCTTCATCTGGTCCTGAGACTTCGTGGAGGAA 654953 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | || ||||| || | || || ||| | |||||| | ||| | ||| | Sbjct 654042 AATGCAGATTTTCGTAAAGACTCTCACAGGGAAAACCATCACCTTGGAAGTCGAAGCCTC 653983 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| |||||| | || ||| || || ||||| || || || ||||| ||||| Sbjct 653982 TGACACGATCGAGAATGTGAAAGCCAAAATCCAGGACAAGGAGGGAATTCCTCCTGATCA 653923 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || | | || | || ||||| || | || |||| ||| | || || || Sbjct 653922 GCAGCGTTTGATCTTCGCTGGCAAGCAGTTAGAGGATGGACGAACTCTATCTGATTACAA 653863 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||| ||||| || || || | |||||||||||||||||| ||||||| Sbjct 653862 CATCCAAAAGGAGTCCACGCTTCATCTGGTCCTGAGACTTCGAGGAGG 653815 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | || ||||| || | || || ||| | |||||| | ||| | ||| | Sbjct 654498 AATGCAGATTTTCGTAAAGACTCTCACAGGGAAAACTATCACCCTGGAAGTCGAAGCTTC 654439 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || || ||||| | || ||| || || || || || || || ||||| ||||| Sbjct 654438 AGATACGATCGAAAACGTGAAAGCCAAAATCCAGGATAAGGAGGGAATTCCTCCTGATCA 654379 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || | | || | || ||||| ||||| || |||| ||| | || || || Sbjct 654378 GCAGCGTTTGATCTTCGCTGGCAAGCAACTAGAGGATGGACGAACTCTATCTGATTACAA 654319 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 |||||| || || |||||| | ||| |||||||||||||| | ||||||| Sbjct 654318 CATTCAGAAGGAGTCTACTCTTCATTTGGTCCTGAGACTTCGTGGAGGAA 654269 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | || ||||| || | || || ||| | |||||| | ||| | ||| | Sbjct 654726 AATGCAGATTTTCGTAAAGACTCTCACAGGGAAAACCATCACCCTGGAAGTCGAAGCCTC 654667 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| |||||| | || ||| || || ||||| || || || ||||| ||||| Sbjct 654666 TGACACGATCGAGAATGTGAAAGCCAAAATCCAGGACAAGGAGGGAATTCCTCCTGATCA 654607 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || | | || | || ||||| || | || |||| ||| | || || || Sbjct 654606 GCAGCGTTTGATCTTCGCTGGCAAGCAGTTAGAGGATGGACGAACTCTATCTGATTACAA 654547 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||| ||||| || || || | |||||||||||||||||| | ||||||| Sbjct 654546 CATCCAAAAGGAGTCCACGCTTCATCTGGTCCTGAGACTTCGTGGAGGAA 654497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478359837496960