Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq36416 95.1 1e-14 >seq36416 Length=241146 Score = 95.1 bits (104), Expect = 1e-14 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 111300 CGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGA 111359 |||||||||||| || |||| ||| |||||||||||||| ||| | |||| || |||| Sbjct 80541 CGATCAACAAAGACTGATTTTTGCCGGCAAACAATTGGAGGATGGGAGAACTCTGTCCGA 80600 Query 111360 TTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111414 |||||| || ||||| || || || ||||||| ||||| || || | || ||| Sbjct 80601 TTATAACATCCAAAAGGAGTCCACGTTACATTTGGTGTTACGCTTGAGAGGCGGC 80655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422779281505600