Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_010106.1
Length=52975
Score E
Sequences producing significant alignments: (Bits) Value
seq11667 150 6e-32
>seq11667
Length=326
Score = 150 bits (166), Expect = 6e-32
Identities = 211/295 (72%), Gaps = 6/295 (2%)
Strand=Plus/Plus
Query 51957 ACGGCATATTCGAGAAGTTAATTGAGAAACAATTGTCATTCTTCTGGCGACCGGAAGAGG 52016
||| |||||| || ||| | ||||||||||||||||| || |||||||| ||||||||||
Sbjct 1 ACGACATATTTGAAAAGCTGATTGAGAAACAATTGTCGTTTTTCTGGCGTCCGGAAGAGG 60
Query 52017 TAGACGTTTCCCAGGACCGTATTGATTATCAGAAGCTACCTGCAAACGAACAACACATTT 52076
|||| || || | || || || ||||||||| ||| || | ||||| |||| || |
Sbjct 61 TAGATGTGTCTCGCGATCGCATCGATTATCAGGCGCTGCCGGAGCACGAAAAACATATCT 120
Query 52077 TCACCAGTAATCTTCGTTATCAGATTCTTCTTGACTCAATTCAGGGACGTGGGCCCAA-- 52134
| | ||||| || ||||||| || || || ||||| ||||| || | |||||
Sbjct 121 TTATTAGTAACCTCAAATATCAGACGCTGCTGGATTCAATCCAGGGCCGCAGCCCCAATG 180
Query 52135 -CACAGTTTTGCTTCCAATCGTGAGCATTCCTGAATTGGAGACGTGGATTGAAACCTGGT 52193
| | |||| || || | || || || | || || ||| | |||||||||
Sbjct 181 TTGCGCTATTGCCTCTGATTTCG---ATACCGGAGCTAGAAACCTGGGTGGAAACCTGGG 237
Query 52194 CTTTCTCCGAGACTATTCATTCACGTTCTTATACCCACATCATTCGTAATATTGT 52248
| || || || || || ||||| || || |||||||| ||||| || ||||| ||
Sbjct 238 CGTTTTCTGAAACCATACATTCGCGCTCCTATACCCATATCATCCGCAATATCGT 292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 169296677107792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |