Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_011357.1
Length=62147
Score E
Sequences producing significant alignments: (Bits) Value
seq34955 149 2e-31
seq16755 93.3 2e-14
>seq34955
Length=219
Score = 149 bits (164), Expect = 2e-31
Identities = 163/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 167 GCGTTGCTATGTTCAATACCATTCGCTTTGGTTAAATGCTCAAGGCGAAAGCTCGGTAGA 226
|||||| ||||| ||| || || || || | ||||||||| || ||||| || |
Sbjct 217 GCGTTGGCATGTTTAATCCCGTTAGCCCGCGTCAGATGCTCAAGCCGGAAGCTGGGCATT 158
Query 227 CCGTCATCATTTTCAGGCCAGTTTATTCCTTCCGGGCGCAGGGCATAGCAGGCACGCATA 286
|| | |||||| ||||| | || || || ||||||||||||||||| || ||||
Sbjct 157 CCTTTATCATTCAGCGGCCATTCGATGCCATCGGGGCGCAGGGCATAGCAAGCGCGCACG 98
Query 287 ACATCCAGTAAATCCCAGCGCGAGTTATCATGCTGCCAGCTCCAGGCGTAAGGATCGTAG 346
||||| || | ||||| || || ||| | ||||||||||||||| |||| ||||||||
Sbjct 97 ACATCGAGCAGGTCCCAACGGGAATTACCCTGCTGCCAGCTCCAGCCGTAGGGATCGTAA 38
Query 347 AAATTACGATAAAAAACGTTGCGTGTGACTTCGTCGT 383
||||| |||||||| | ||| || |||| || ||||
Sbjct 37 AAATTGCGATAAAACAGGTTTCGGCTGACCTCATCGT 1
>seq16755
Length=287
Score = 93.3 bits (102), Expect = 2e-14
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand=Plus/Minus
Query 24375 CGCTCGGCCCTTTAGCTCAGTGGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTT 24434
|||| || || ||||||||||||| ||||| |||||||||||||||| ||||||||||
Sbjct 173 CGCTTGGTCCCTTAGCTCAGTGGTTAGAGCAAGCGACTCATAATCGCTTAGTCGCTGGTT 114
Query 24435 CAAATCCAGCA-AGGCCACCA 24454
||| ||||||| ||||||||
Sbjct 113 CAAGTCCAGCAGGGGCCACCA 93
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 198629452339344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |