Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_011357.1 Length=62147 Score E Sequences producing significant alignments: (Bits) Value seq34955 149 2e-31 seq16755 93.3 2e-14 >seq34955 Length=219 Score = 149 bits (164), Expect = 2e-31 Identities = 163/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 167 GCGTTGCTATGTTCAATACCATTCGCTTTGGTTAAATGCTCAAGGCGAAAGCTCGGTAGA 226 |||||| ||||| ||| || || || || | ||||||||| || ||||| || | Sbjct 217 GCGTTGGCATGTTTAATCCCGTTAGCCCGCGTCAGATGCTCAAGCCGGAAGCTGGGCATT 158 Query 227 CCGTCATCATTTTCAGGCCAGTTTATTCCTTCCGGGCGCAGGGCATAGCAGGCACGCATA 286 || | |||||| ||||| | || || || ||||||||||||||||| || |||| Sbjct 157 CCTTTATCATTCAGCGGCCATTCGATGCCATCGGGGCGCAGGGCATAGCAAGCGCGCACG 98 Query 287 ACATCCAGTAAATCCCAGCGCGAGTTATCATGCTGCCAGCTCCAGGCGTAAGGATCGTAG 346 ||||| || | ||||| || || ||| | ||||||||||||||| |||| |||||||| Sbjct 97 ACATCGAGCAGGTCCCAACGGGAATTACCCTGCTGCCAGCTCCAGCCGTAGGGATCGTAA 38 Query 347 AAATTACGATAAAAAACGTTGCGTGTGACTTCGTCGT 383 ||||| |||||||| | ||| || |||| || |||| Sbjct 37 AAATTGCGATAAAACAGGTTTCGGCTGACCTCATCGT 1 >seq16755 Length=287 Score = 93.3 bits (102), Expect = 2e-14 Identities = 70/81 (86%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 24375 CGCTCGGCCCTTTAGCTCAGTGGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTT 24434 |||| || || ||||||||||||| ||||| |||||||||||||||| |||||||||| Sbjct 173 CGCTTGGTCCCTTAGCTCAGTGGTTAGAGCAAGCGACTCATAATCGCTTAGTCGCTGGTT 114 Query 24435 CAAATCCAGCA-AGGCCACCA 24454 ||| ||||||| |||||||| Sbjct 113 CAAGTCCAGCAGGGGCCACCA 93 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198629452339344