Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_012740.1 Length=166418 Score E Sequences producing significant alignments: (Bits) Value seq12851 125 8e-24 >seq12851 Length=316 Score = 125 bits (138), Expect = 8e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 139693 CTGTACGCCGTAATCAAGATGACGAATGCGGTTATCTTCCACCCCCTTATTGTTCTTTAA 139752 ||||||||||||||| | ||| || | ||||| ||||||| || |||||| |||| Sbjct 315 CTGTACGCCGTAATCCATATGCCGCACCCGGTTGGCTTCCACGCCGCGATTGTTTTTTAG 256 Query 139753 CACAATCAGACTTTCAAACTCTAAATGCCATATTGGGTAATAGAGAGTCGCCGCCCCGCC 139812 ||| | ||||||||| | ||| |||||||| || || || | | || ||||| ||||| Sbjct 255 CACCAGCAGACTTTCGATCTCCAAATGCCACATAGGATAGAACAACGTGGCCGCGCCGCC 196 Query 139813 ACGAATGCCGCCTTGTGAGCATGACTTAACGGCCGTCTGAAAATGTTTCCAGAATGGGAT 139872 || | |||||| || || || || || || || ||||| |||||||| |||| || || Sbjct 195 GCGCACGCCGCCCTGAGAACAGGATTTGACCGCGGTCTGGAAATGTTTATAGAACGGAAT 136 Query 139873 AACGCCAGTATG 139884 | || ||||| Sbjct 135 ACAACCGGTATG 124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532073063891840